Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03267 ATGTCTTCGGTTTATGTAAGTGGGTTCCTTTTGTTTTCTCATCTAATTGTGCTGCTTCTCTCAGCTGGGAATGTAAATGGACACCATGACGATTGTCCAGACTCATTTGATTGCGGAAGTCTTGGGATGATTTCTTTCCCTTTTACCAAGTCAGCACGCAAGGACTGTGGTGCATTGGCAATCCATGGTTGTGATGCTCATAACTCAACTTCACTGAAGCATGTCCAGTATGGAGGAAAACAGTTTGAAGTTAGAAAAGTTGAAAGTCACCTGCGGCACGGGAGTATTACCATTATTGACGAGGATTTCATCAAGGCTTTGCAAAATGCTTGTGAGGCCTTCAGCTATCATGTTCCTCTCCCTTCTCCCTCTCCTTTAGGCTATCTTTATATGAAAGACAATATAACCACGTTCAAATGCAACCGCACCCTCAAAGTCAGCACTCCAATTAATTTCATAAAAAATAACACCTGTCCCTTCTACGATTTTTACTTCGGCCCTTCAAACTCGGATGATGAGTCCCAGAACTCTTCAGCGTCATGTTCAGTGGCTCACCTTCCCGTGATTCAAGGTTTTGCGTTATCCCGAAACCCATATCCCTTCTTAACCCGTGAAATTACAATCAGTTTCAAATCTTCAGATGACTGCTACCGGTGTTCACACGATAGAGAAGGCCACTGTCTACTTGACAGCAACGGAAAATTTTATTGCGCCAAAAGGAAGAATAGAAGTTCGACTTGGAAGCTCGCAATGGCGCTAGGCATCGGTGTTGGACCGTGGATCATATTTGGGTTGTGCCTCACGTTACGCCACTGCAAAAGGAAATATGGTCCTGCTGCACACATCCAGCTCCAATCAATCAATTCTTGTGTTGATCCCAACCCAAATCGCGACATAGATACTGAAAGGGTGTTCTTTGGGGTACCTGTCTTCTCCTATAAGGAGCTTCAAGAAGCAACCAACAATTTTGACCGCACTAGAAAGCTTGGTGAAGGAGGTTTTGGCATTGTTTACTATGGAAAACTCATAGATGGAAGGGAAGTTGCAGTCAAATACCTATTTGAGCACAATTACAGGAGAGTGGAACAGTTTATGAATGAAATTGAAATCCTCACTCGCTTGCGCCACAGAAATCTTGTGTCCCTATATGGCTGCACTTCACGTCACAGCCGTGAGCTCCTTCTTGTATATGAATACATTCCAAATGGCACAGTTGCTTTCCATCTCCATGGTGATTTAGCAAGAGCTGGTTTGTTGACATGGCCTATTCGAATGCAAATTGCCATAGAGACTGCTACTGCATTGGCTTATCTCCATGCTTCTGACATCATTCACCGTGATGTCAAAACCAACAACATTCTCCTTGACATTAATTTTTCTGTTAAGGTAGCAGACTTTGGACTTTCAAGGTTGCTTCCCAATGATGTGAGCCATGTCTCCACAGCTCCACAAGGGAGTCCTGGGTACCTTGATCCTGAATATTTCCAACTTTACAAGCTCACAGGCAAGAGTGATGTGTATAGTTTTGGGGTTGTGCTTATTGAGCTGATATCATCTATGCCTGCAATTGATGCGACCAGGGAAAGGGATGAGATTAACTTGGCAATTCTAGCCACAAAGAAGATTCAGAAAGGTTCACTTGGTGAGCTGGTAGACCCATCCCTTGGTTTTGAATCAGACCATGAAATTATAAGGATGGTAAGTTCGGTGGCAGAATTGGCTTTTCAGTGTGTACAAGGAGACAACGAATTAAGACCTTCCATGGATCAAGTTCTGCAAACACTCAAGAGAATTGAGGGTGGGAATTATGAGTATGAGCATCTAGAGAAAGGAGATGATGGTGCTGGGATCTCGCGCACCGAAGAAGTACATCCACCATCATCAATCTCGCGGGAGTGGGGCCAAGTTGGATTTTTGATGAATAAAAAGAAGCCATCTTCACCAAAGTCCTTGACTGAGAAATGGGAAAGTGAATCTACTACGCCTAATGCCAGTAGTTAA 2001 0.4363 MSSVYVSGFLLFSHLIVLLLSAGNVNGHHDDCPDSFDCGSLGMISFPFTKSARKDCGALAIHGCDAHNSTSLKHVQYGGKQFEVRKVESHLRHGSITIIDEDFIKALQNACEAFSYHVPLPSPSPLGYLYMKDNITTFKCNRTLKVSTPINFIKNNTCPFYDFYFGPSNSDDESQNSSASCSVAHLPVIQGFALSRNPYPFLTREITISFKSSDDCYRCSHDREGHCLLDSNGKFYCAKRKNRSSTWKLAMALGIGVGPWIIFGLCLTLRHCKRKYGPAAHIQLQSINSCVDPNPNRDIDTERVFFGVPVFSYKELQEATNNFDRTRKLGEGGFGIVYYGKLIDGREVAVKYLFEHNYRRVEQFMNEIEILTRLRHRNLVSLYGCTSRHSRELLLVYEYIPNGTVAFHLHGDLARAGLLTWPIRMQIAIETATALAYLHASDIIHRDVKTNNILLDINFSVKVADFGLSRLLPNDVSHVSTAPQGSPGYLDPEYFQLYKLTGKSDVYSFGVVLIELISSMPAIDATRERDEINLAILATKKIQKGSLGELVDPSLGFESDHEIIRMVSSVAELAFQCVQGDNELRPSMDQVLQTLKRIEGGNYEYEHLEKGDDGAGISRTEEVHPPSSISREWGQVGFLMNKKKPSSPKSLTEKWESESTTPNASS* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03267 666 Gene3D Phosphorylase Kinase; domain 1 296 399 - -
Rops6g03267 666 MobiDBLite consensus disorder prediction 609 666 - -
Rops6g03267 666 ProSiteProfiles Protein kinase domain profile. 323 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03267 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Rops6g03267 666 SMART serkin_6 323 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03267 666 MobiDBLite consensus disorder prediction 652 666 - -
Rops6g03267 666 Gene3D Transferase(Phosphotransferase) domain 1 400 605 - -
Rops6g03267 666 FunFam Wall-associated receptor kinase-like 20 400 607 - -
Rops6g03267 666 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 13 660 IPR044652 GO:0004672
Rops6g03267 666 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Rops6g03267 666 Pfam Protein kinase domain 324 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03267 666 SUPERFAMILY Protein kinase-like (PK-like) 299 595 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03267 Rops-Chr6 56655330 56660041 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03267 32 666 Receptor kinase-like Gene Family AT1G25390 44.917 2.29e-164 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Rops6g03267 Pkinase 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03267 - - gmx:100778085 870.537