Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03264 ATGTTACGGCACTGCAAAGGGAAATTTGGTGGTGCACACGCCCAGCTCCAATCAAGAAACACTGGTGCTGATGATCCAGACACAGAGACTAACAGGATCTTCTTTGGGGTACCTGTCTTCTCTTATAAAGAGCTTCAAGAAGCAACAAACAATTTTGACCGCACTAGAAAGCTTGGAGAAGGAGGCTTTGGCAGTGTTTACTATGGAAAACTCACAGATGGAAGGGAAGTTGCAGTCAAACACCTATTCGAGCACAATTACAGGAGAGTGGAACAGTTCATGAATGAAATTGAGATTCTAACTCGCTTGCGCCATAGAAATCTTGTGTCCTATTTGGCTGCACTTCACGTCACAGCCGTGAGCTACTACTTGTGTATGAATATGTCCCAAATGACACTGTTGCTTGGTGATTTTGGAAGGGCTAATTTGCTGACTTGGCCCATTCGAATGCAAATTGCCATTGAAACTGCTACTGCATTGGCTTATCTCCATGCTTCTGACATCATTCACCGTGACGTCAAAACCAACAACATTCTCCTTGACTTTAATTTTTCGGTTAAAGTAGCAGACTTTGGGCTTTCAAGGTTGTTCCCCAACGATGTAAGCCATGTTTCCACAGCTCCACAAGGGAGTCCAGGCTACCTTGACCCTGAATATTTCCAATGTGACCAGCTCACAAGCAAGAGTGACGTGTATAGCTTTGGGGTTGTGCTTATTGAGCTAATATCATCTATGCCAGCTGTTGATGCAGCTAGGGAAAGGGATGAAATTAACTTGGCAAATCTAGCCATAAAGAAGATTCAGAAAGGTGCACTTGGTGAGCTGGTAGATCCGTCCCTTGGTTTTGAGTCAGACCATGAAGTTAAACGGATGGTAAGTTCGGTGGCAGAATTGGCTTTTCAGTGTGTGCAAGGAGACAAGGAATTAAGACCTTCCATGGATCAAGTTCTGCAAACACTAAACAAAATTGAAAGTGGGAACTATGAAGCTGAACATCTATACAGAGGATATGATGGTTTTGGGATCGTGCACAGTGAAGAAGTAAGATTTTTCACTCACTGGACTGAGGTCACGTTAGACTCTTGA 1086 0.4365 MLRHCKGKFGGAHAQLQSRNTGADDPDTETNRIFFGVPVFSYKELQEATNNFDRTRKLGEGGFGSVYYGKLTDGREVAVKHLFEHNYRRVEQFMNEIEILTRLRHRNLVSYLAALHVTAVSYYLCMNMSQMTLLLGDFGRANLLTWPIRMQIAIETATALAYLHASDIIHRDVKTNNILLDFNFSVKVADFGLSRLFPNDVSHVSTAPQGSPGYLDPEYFQCDQLTSKSDVYSFGVVLIELISSMPAVDAARERDEINLANLAIKKIQKGALGELVDPSLGFESDHEVKRMVSSVAELAFQCVQGDKELRPSMDQVLQTLNKIESGNYEAEHLYRGYDGFGIVHSEEVRFFTHWTEVTLDS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03264 361 FunFam Wall-associated receptor kinase-like 20 126 332 - -
Rops6g03264 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Rops6g03264 361 Gene3D Transferase(Phosphotransferase) domain 1 127 336 - -
Rops6g03264 361 SMART serkin_6 52 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03264 361 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 22 331 IPR044652 GO:0004672
Rops6g03264 361 ProSiteProfiles Protein kinase domain profile. 52 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03264 361 Pfam Protein kinase domain 53 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03264 361 ProSitePatterns Protein kinases ATP-binding region signature. 58 80 IPR017441 GO:0005524
Rops6g03264 361 Gene3D Phosphorylase Kinase; domain 1 24 121 - -
Rops6g03264 361 SUPERFAMILY Protein kinase-like (PK-like) 34 322 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03264 Rops-Chr6 56609020 56610218 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03264 27 325 Receptor kinase-like Gene Family AT1G25390 61.513 8.31e-128 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Rops6g03264 Pkinase 3.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03264 - - aprc:113871894 533.872