Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03262 ATGAAAGTTGCCATAGAGACCGCTACTGCTTTGGCTTATCTCCATGCTTCTGATATCATTCACCGTGATGTGAAAACAAACAACATTCTCCTTGACAACACTTTCTGTGTTAAAGTTGCAGATTTTGGACTCTCAAGACTGTTCCCTAATGATGTTACCCATGTTTCCACAGCTCCACAAGGGACCCCTGGTTATGTTGATCCTGAATATCATCAGTGCTACCAGCTTACAACCAAGAGTGATGTGTATAGCTTTGGGGTTGTGCTTGTTGAGCTAATATCATCTATGCCAGCTGTTGATATGGCCAGGCATAAGGATGAGATTAACTTGGCTAATCTAGCCGTAAGGAAGATTCAAAAAAGTGCAATTGGTGAGTTGGTGGATCCTTCCCTTGGTTTTGAGTCAGATAGTGATGTGACAAGGAAAATAGTTTCGATAGCAGAATTGGCTTTTCAGTGCTTGCAAAGGGATAAGGAATTGAGACCCTCTATGGATGAGGTTTTAGAGGTGCTGAGGAGAATTGAAAGTGGGAACGATGAGCCTGGACATGTAGAGGAAGTGATAGTTGGTGGGGCAGGGATGTCACATATTGAGGTGCAACCACCCTCACCAGATCATGATGAGGTGAAATTGTTGAGGAATATGAAATTAACTCGTTCGCCAAAGGCTGTGACAGATAAATGGGATAGTGACTCCACTACTCCTAATGTCAGTGGTCAATAG 723 0.4315 MKVAIETATALAYLHASDIIHRDVKTNNILLDNTFCVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYHQCYQLTTKSDVYSFGVVLVELISSMPAVDMARHKDEINLANLAVRKIQKSAIGELVDPSLGFESDSDVTRKIVSIAELAFQCLQRDKELRPSMDEVLEVLRRIESGNDEPGHVEEVIVGGAGMSHIEVQPPSPDHDEVKLLRNMKLTRSPKAVTDKWDSDSTTPNVSGQ* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03262 240 SUPERFAMILY Protein kinase-like (PK-like) 2 173 IPR011009 -
Rops6g03262 240 ProSiteProfiles Protein kinase domain profile. 1 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03262 240 Gene3D Transferase(Phosphotransferase) domain 1 1 187 - -
Rops6g03262 240 ProSitePatterns Serine/Threonine protein kinases active-site signature. 19 31 IPR008271 GO:0004672|GO:0006468
Rops6g03262 240 FunFam Wall-associated receptor kinase-like 20 1 183 - -
Rops6g03262 240 Pfam Protein kinase domain 3 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03262 240 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 233 IPR044652 GO:0004672
Rops6g03262 240 SMART serkin_6 1 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03262 240 MobiDBLite consensus disorder prediction 221 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03262 Rops-Chr6 56597025 56597747 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03262 1 239 Receptor kinase-like Gene Family AT1G25390 60.656 1.24e-95 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Rops6g03262 Pkinase 3.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03262 - - aprc:113871893 399.053