Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03260 ATGACCTCCCTTTCTATTTTCAAATCATTAATTTTCCCGCAGCTTCTGCTTCTGCTTCTTGTTTCAGCTCAAGAGGGAAAGTGTCCACCTTCTTTTGATTGTGGATTTCTTAGGCAGATCAAATTCCCTTTCACAAACACACAGCGACCACAGTGCGGCATATTGGCTATACATGGCTGTGATGATGATAAGGCTGCTCCAAAAAGCATCCAACTAAGCAACACACGGTTTGTTAATGTTTCATACGTGGATGGTTATACCATAACGGTCCAAGATGATGATCATCGGAAGAATATACGATTCAACAGTTGCAAAGTCTTTAACAATTTTACTCTTCCTCCCACCTCTCCTTTAGCTTCTTTCTACGTCAAATATAATATAACCATGTTCAAATGCAATCCCTCCCTTAATGCCACCCTTCCCAATATTTTTTATAACTATACAAACTGTTCTGATTATAATATCTACTATGCCTTTCCAAATACTATAAAACCTCCTGGTTTCAACTGGCCAAAATCTTTGGCACCGTGTTCAGCGGTTCAGGTTGCAGTAAGAGACGAGCCTACTGATGACCCCTTTGATTTTCTATCTCCTGAGATCATCATTGAAGTGCAATTATCTGACGATTGTGAAAAGTGTATTCATCACAAAAAGGGCAGATGTCAACTTGACATTCACGGAAAATTTTATTGTGCCGCAGGGCATCAAAGTTTAGCGTGGAAGTTGGGAATTGGTATTGGACTCTCTGTCACTCTTATAATTGGGTTGTTGATCATATGGCACTGCAAACCAAGCTGTGTTCCTGAATTCTACTCAAATCCATACCCAGAGAGTGGCAGCACTGTCTACTTTGGGGTCCCGGTCTTCTCCTATAAGGATCTTCAAGTAGCAACAAAAAAGTTTGACCGTTCAACAGAACTTGGAGAAGGAGGATTTGGAACTGTCTACTATGGAAAACTCAAAGATGGACGTGAAGTTGCTGTGAAGCGCCTATATGAGCACAATTATAGGCGAGTAGAACAGTTCGTGAACGAAATCAAGATCCTCACACGCTTGCGCCACAGAAATCTAGTGTCTCTCTATGGCTGCACTTCAAGTCACGGCCGTGAACTATTGCTTGTATATGAATACATTTCAAATGGGACTGTGGCCAGTCATCTCCGTCGTGAATCAACAAATCCTGGCATTTTGGCATGGCCAATCCGAATGAAAGTTGCCATAGAGACTGCTACTGCTTTGGCTTATCTCCATGCTTCTGATATCATTCACCGTGATGTGAAAACAAACAACATTCTCCTTGACAACACATTTTGTGTTAAAGTTGCAGATTTTGGACTCTCAAGACTGTTCCCTAATGATGTTACCCATGTTTCCACAGCTCCACAAGGGACCCCTGGTTATGTTGATCCTGAATATCATCAGTGCTACCAGCTTACAACCAAGAGTGATGTGTATAGCTTTGGGGTTGTACTTGTTGAGCTGATATCATCTATGCCAGCTGTTGATATGGCCAGGCATAAGGATGAGATTAACTTGGCTAATCTAGCCATAAGGAAGATTCAAAAAAGTGCAATTGGTGAGTTGGTGGATCCTTGCCTTGGTTTTGAGTCAGATAGTGATGTTACAAGGAAAATAGTTTCCATAGCAGAATTGGCTTTTCAGTGCTTGCAAAGGGATAAGGAATTGAGACCCTCTATGGATGAGGTTTTGGAAGTGCTGAGGAGAATTGAAAGTGGGAAGGATGAGCCTGAACATGTAGAGGAAGTGATAGTTGGTGGGGCAGGGATGTCACACATTGATGTGCAACCACCTTCACCAGATCATGATGAGGTGAAATTGTTGAGGAATATGAAATTAACTCGTTCGCCAAAGGCTGTGACAGATAAATGGGACAGTGACTCCACTACTCCTAATGTCAGTGGTCAATAG 1929 0.4199 MTSLSIFKSLIFPQLLLLLLVSAQEGKCPPSFDCGFLRQIKFPFTNTQRPQCGILAIHGCDDDKAAPKSIQLSNTRFVNVSYVDGYTITVQDDDHRKNIRFNSCKVFNNFTLPPTSPLASFYVKYNITMFKCNPSLNATLPNIFYNYTNCSDYNIYYAFPNTIKPPGFNWPKSLAPCSAVQVAVRDEPTDDPFDFLSPEIIIEVQLSDDCEKCIHHKKGRCQLDIHGKFYCAAGHQSLAWKLGIGIGLSVTLIIGLLIIWHCKPSCVPEFYSNPYPESGSTVYFGVPVFSYKDLQVATKKFDRSTELGEGGFGTVYYGKLKDGREVAVKRLYEHNYRRVEQFVNEIKILTRLRHRNLVSLYGCTSSHGRELLLVYEYISNGTVASHLRRESTNPGILAWPIRMKVAIETATALAYLHASDIIHRDVKTNNILLDNTFCVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYHQCYQLTTKSDVYSFGVVLVELISSMPAVDMARHKDEINLANLAIRKIQKSAIGELVDPCLGFESDSDVTRKIVSIAELAFQCLQRDKELRPSMDEVLEVLRRIESGKDEPEHVEEVIVGGAGMSHIDVQPPSPDHDEVKLLRNMKLTRSPKAVTDKWDSDSTTPNVSGQ* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03260 642 Pfam Protein kinase domain 303 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03260 642 Gene3D Phosphorylase Kinase; domain 1 276 377 - -
Rops6g03260 642 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Rops6g03260 642 ProSiteProfiles Protein kinase domain profile. 301 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03260 642 MobiDBLite consensus disorder prediction 619 642 - -
Rops6g03260 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Rops6g03260 642 FunFam Wall-associated receptor kinase-like 20 378 586 - -
Rops6g03260 642 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 13 635 IPR044652 GO:0004672
Rops6g03260 642 SMART serkin_6 301 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03260 642 FunFam receptor-like protein kinase FERONIA 274 377 - -
Rops6g03260 642 Gene3D Transferase(Phosphotransferase) domain 1 378 589 - -
Rops6g03260 642 SUPERFAMILY Protein kinase-like (PK-like) 279 579 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03260 Rops-Chr6 56561965 56569219 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03260 32 641 Receptor kinase-like Gene Family AT1G25390 47.544 8.76e-171 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Rops6g03260 Pkinase 9.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03260 - - aprc:113871893 859.366