Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03259 ATGAGTGCGAGGAGGACGTTGCCAAACAGGTATGATAAAGAGAAAGGTAGCACAATGTTTGATACCGATAACTCATTACTTTTCTTGGAGACGAGTCTTCCTTTCAAAAAAAAGAGGCCAGAAGGAACAGGGCATGAAAAAAAGCTAAAACACCCAAAACTTGTTCTTAAACAAACTTCAAAAGCATGTGCAGATCTCTGTTTTCAAAATTACATGAATGATCCAGATGCTCCTGGTGGAAAGCTTGTCATGCAGCAACCTCAGGGGTTGGCATCTATTGTGCTTTTTTTCAAAGGACCTCTTGGAAATCTTGAATCTTCACAAGTCACTAGCTGGAATGAGTCACCAGCTGCTGGGGCTAAGAAGAGTGATAGCATTTTTGCAGATGAGCTAGGAATCCCTTTCCTTGAGACAAGTGCTAAAGACTCAATCAATGTGGAGCAGGCTTTCTTAACTATGGCAGCTGAGATTAAGAAGATGGGAAGCCAACCGACTGTTAGTAAGTCAGCAAAAACTATTCGAATGAAGGGGCAACCAATCCCACATAAAAACAACTGTTGTGGTTAG 567 0.4162 MSARRTLPNRYDKEKGSTMFDTDNSLLFLETSLPFKKKRPEGTGHEKKLKHPKLVLKQTSKACADLCFQNYMNDPDAPGGKLVMQQPQGLASIVLFFKGPLGNLESSQVTSWNESPAAGAKKSDSIFADELGIPFLETSAKDSINVEQAFLTMAAEIKKMGSQPTVSKSAKTIRMKGQPIPHKNNCCG* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03259 188 Gene3D - 113 174 IPR027417 -
Rops6g03259 188 Pfam Ras family 126 158 IPR001806 GO:0003924|GO:0005525
Rops6g03259 188 MobiDBLite consensus disorder prediction 165 188 - -
Rops6g03259 188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 173 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03259 Rops-Chr6 56561340 56564942 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03259 48 86 C2H2 Transcription Factor Family AT2G27100 58.974 2.00e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03259 K07874 - gmx:100796206 108.612