Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03257 ATGGCTCTAGTTTATGGATTTCTCTTCCTTTTGTTTCTGCTTCTCTTGGCTGGTGGAGATGGGAAAGGGTACCAAGAAGAGTGTCCACCTTCATTTCACTGTGGGTATTTTAATATAAGCTTCCCTTTCACTGTAACAGAACGCCAGGACTGTGGCTTATTGTCCATACATAATTGTGATGATTCACACAAGCCCAAAATGATCCAATTACGGAATAAATGGTTCGACGTTATACACCTTCCTCAGTATCCCCGTACTACTACCTCTGGATTCAGAGACAGGGATTTGTATAAACTTCTGCAATCCAAAAGTTGTGAAGCTTTCAGATATAATTATACCTTTCCTCCCACCTTTCACTTTGCTTCTTTTCATGTGGAATTCAAAGCAACCCTGTTCAGGTGCAACCGCACCCTCCATGTCAGCCCCACAACACTTATGCATAACTATACAGTGTATACATTGTGCCATGACTACGATCTCTACTACACGCCTCTTCCCACTCCCGATTATGCTTTGACAGCATGTACAAAGGTCCAGCTTCCAATCAAAGACCTCCCTGACGCTGAAGATCCTTTTACATTCCTAACCGCTGATATCTACATTGGAGTAAAATTAACAGAGGAATGTTCAAATTGTCACTATCACCAAAGAGGGCGGTGTCAACTTGACAGCAGAGGGAGATTTTTTTGTGCCAATGCTAAGAAGGAAAAAAGGTTGAGTCGGAATGCCAAACTGGCTATAGGTTTAGGTATTGGAATCCCAGGCATCTTGATAATTGGGATGCTGCTTCTCCTTCTACTCTACAAACGAAAACATGGTGGACACTTCAAATCTAATAATTCTTATTCTGATTCCTCCTTAAATTGTGGCGTGTTCTTTGAAGTTCCTGTCTTCTCCTACGAGGAGCTTAAAAAAGTAACAAACAATTTCGACCATACTAAAGAACTTGGAGATGGAGGCTTTGGTACTGTCTACTATGGGAAACTCCCAGATGGAAGGGAAGTTGCTGTCAAGCGCTTATATGAGCACAACTACAGGCGAGTAGAACAGTTCATTAATGAAGTTAAGATCCTCACACCTTTGCGGCACAAAAATCTTGTGACTCTCTATGGCTGCACTTCAAGATGTCACTCATGTCTCCACGGCTCCACAAGGGACCCCTGCAGAAGTAAGGATGAAATTAACTTGTCAGATCTAGCCATAAAGAAGATTCAAGAAAATGCAATTGGTGAGCTGGTAGATCCTTTTCTTGGTTTTGATTCGGACAGTGAGGTTAAGGGGATGATAGTTTCAGTGGCAGAATTGGCTTTTCAATGTTTGCAAAGGGACAAGGAATTGAGACCTTCTATGGAAGAAGTCTTGGATGAACTGAGGAGAATTCAGAGTGGGAAGGATAAGGTAGAGCTTCTAGAGGAAGCAGATGTTCATGATGGTGGAGTTTCTCACAGTAATGTACATACACCACCACCAGCCTCACCTGAATGGGATGTAGTTGGATTATTGAAGAATATGAAGCAGCCGACTTCACCAAACAACGTCACTGATAAATGGGAAAGTAAATGTACTACGCCCAATGCCAGTGGTTAA 1587 0.4228 MALVYGFLFLLFLLLLAGGDGKGYQEECPPSFHCGYFNISFPFTVTERQDCGLLSIHNCDDSHKPKMIQLRNKWFDVIHLPQYPRTTTSGFRDRDLYKLLQSKSCEAFRYNYTFPPTFHFASFHVEFKATLFRCNRTLHVSPTTLMHNYTVYTLCHDYDLYYTPLPTPDYALTACTKVQLPIKDLPDAEDPFTFLTADIYIGVKLTEECSNCHYHQRGRCQLDSRGRFFCANAKKEKRLSRNAKLAIGLGIGIPGILIIGMLLLLLLYKRKHGGHFKSNNSYSDSSLNCGVFFEVPVFSYEELKKVTNNFDHTKELGDGGFGTVYYGKLPDGREVAVKRLYEHNYRRVEQFINEVKILTPLRHKNLVTLYGCTSRCHSCLHGSTRDPCRSKDEINLSDLAIKKIQENAIGELVDPFLGFDSDSEVKGMIVSVAELAFQCLQRDKELRPSMEEVLDELRRIQSGKDKVELLEEADVHDGGVSHSNVHTPPPASPEWDVVGLLKNMKQPTSPNNVTDKWESKCTTPNASG* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03257 528 ProSiteProfiles Protein kinase domain profile. 310 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03257 528 MobiDBLite consensus disorder prediction 504 528 - -
Rops6g03257 528 Pfam Protein kinase domain 312 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03257 528 Gene3D Phosphorylase Kinase; domain 1 282 380 - -
Rops6g03257 528 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Rops6g03257 528 SMART tyrkin_6 310 457 IPR020635 GO:0004713|GO:0006468
Rops6g03257 528 SUPERFAMILY Protein kinase-like (PK-like) 283 377 IPR011009 -
Rops6g03257 528 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 376 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03257 Rops-Chr6 56534790 56543949 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03257 386 528 Receptor kinase-like Gene Family AT1G25390 47.260 2.35e-31 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Rops6g03257 Pkinase 8.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03257 - - gmx:100305407 370.933