Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03255 ATGCTACTTCTCTTGGCGAGTGGAGATGGGAATGGGTCTCAAGAAGAGTGTCCACCTTCATTTAATTGTGGGTATCTTGGCAATATCAGCTTCCCTTTCATGAAAACAGAACGCCGGGACTGTGGCTTATTGGCCATACATAATTGTGATCATCCACGGAAGCCCAAAATGATCCGATTACAGAATAAAGGGAAACTGTTCCAGGTTATGTATCTTCCTCAGTTTCCAAGTGACAATCCTTCTATTTTTAGAGACACGGATCTATATGAACTTCTGCAATCCAGAAGTTGTGAATCTTTCAAACATAGTTATACTCTTCCTCCCGGCTTTCACTTTGTTTCTTTTCATAACAAAGCCAACACAACCCTGTTCAGGTGCAACCGCACCCTCCATGTCAACACTACAAAAGATATGCATAAATACACAGGGTGCACTGACTATGATATCTACTACACGCCTCTCCTCACTGCTGATGATTCTTTGAAAGCATGTACAAAGGTCCAGTTTCCACTTAAAGACTTCACTGACGCTAGAGATCCTTTTACATTCGTGTCCGCTAATTTCATCTCTGAAGTAAAAATAGAAGAGGAATGCGCAAATTGTCACTATCGCCAAAGAGGGCGGTGTCAACTTGACAGCAGAGGGAGATTTTATTGTGCCAATGCTACGAAGAAAAAAGTGTTGAATCGGAATGCCAAACTGGGAATAGGTATTGGAATCCCAGGCATCTTGATAATTGTGTTGCTGCTTCTCCTTCTACTCTACAAACGAAGACATGGTGGACACTTCAAATCTAGTAATTCTTATTCTGATTCCTCCTTAAATCCACGCCCAGAAAGTGGTGGTGAGTACTTTGGAGTTCCAATCTTCTCCTACGAGGAGCTTAAAAAAGCAACAAACAATTTCGATCATACTAAAGAACTTGGAGATGGAGGCTTTGGTACTGTCTACTATGGTAAACTCTTAGATGGACGGGAAGTGGCTGTCAAGCGCTTATACGAACACAACTACAAGCGAGTAGAACAGTTCATGAATGAAGTTAAGATACTCACATGTTTGCGGCACAAAAATCTTGTGACTCTATATGGCTGCACTTCAAAGTACAGCCGTGAACTACTGCTTGTGTATGAATATATTTCAAATGGCACCGTTGCTTGTCATCTCCATGGTGGATTAGCTAAGCCTGGCTTACTACCATGGTCTATTAGAATTAAAATTGCCATAGAGACTGCTAGTGCTTTGGCTTATCTCCATGCTTCTGATATCATTCATCGTGATGTGAAAAGTAGCAACATACTCCTCGATAACAATTATTGTGTTAAAGTTGCAGATTTTGGCCTTTCAAGGCTATTTCCCTTGGATGTCACTCATGTGTCAACAGCTCCGCAAGGGACCCCTGGTTATGTTGACCCGGAATATCATCAGTGCTACCAGCTTACTAGCAAGAGTGATGTATATAGTTTTGGAGTTGTGCTCATTGAGCTAATATCATCTAAGCCTGCTGTTGACATCAGCAGGAGTAAGGATGAAATTAACTTGTCAAATCTAGCCATAAAGAAGATTCAAGAAAGTGCAATTGGAGAACTGGTTGATCCTTTTCTTGGTTTTGAGACAGACAATGAGGTTAAGGGGATGATAGTTTCAGTGGCAGTATTGGCTTTTCAATGTTTGCAAAGGGACAAGGAATTGAGACCTTCCATGGAAGAAGTCTTGGATGAACTGAGGAGAATTCAGAGTGGGAAGGATAAGGTAGAGCTTCTAGAGGAGGCAGATGTTCTTGATGGTGGAGTTTCACTCAGTAATTTACACCCACCACCACCAACCTCACCTGAATGGGATGAAGTTGGATTATTGAAGAATATGAAGCATCCGACTTCACCAAATACCGTCACTGATAAATGGGAAAGTAAATGTACTACGCCCAATGCCAGTGGTTAA 1938 0.4164 MLLLLASGDGNGSQEECPPSFNCGYLGNISFPFMKTERRDCGLLAIHNCDHPRKPKMIRLQNKGKLFQVMYLPQFPSDNPSIFRDTDLYELLQSRSCESFKHSYTLPPGFHFVSFHNKANTTLFRCNRTLHVNTTKDMHKYTGCTDYDIYYTPLLTADDSLKACTKVQFPLKDFTDARDPFTFVSANFISEVKIEEECANCHYRQRGRCQLDSRGRFYCANATKKKVLNRNAKLGIGIGIPGILIIVLLLLLLLYKRRHGGHFKSSNSYSDSSLNPRPESGGEYFGVPIFSYEELKKATNNFDHTKELGDGGFGTVYYGKLLDGREVAVKRLYEHNYKRVEQFMNEVKILTCLRHKNLVTLYGCTSKYSRELLLVYEYISNGTVACHLHGGLAKPGLLPWSIRIKIAIETASALAYLHASDIIHRDVKSSNILLDNNYCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTSKSDVYSFGVVLIELISSKPAVDISRSKDEINLSNLAIKKIQESAIGELVDPFLGFETDNEVKGMIVSVAVLAFQCLQRDKELRPSMEEVLDELRRIQSGKDKVELLEEADVLDGGVSLSNLHPPPPTSPEWDEVGLLKNMKHPTSPNTVTDKWESKCTTPNASG* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03255 645 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 12 640 IPR044652 GO:0004672
Rops6g03255 645 FunFam Wall-associated receptor kinase-like 20 379 586 - -
Rops6g03255 645 Pfam Protein kinase domain 304 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03255 645 Gene3D Transferase(Phosphotransferase) domain 1 379 591 - -
Rops6g03255 645 ProSiteProfiles Protein kinase domain profile. 302 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03255 645 MobiDBLite consensus disorder prediction 622 645 - -
Rops6g03255 645 Gene3D Phosphorylase Kinase; domain 1 279 378 - -
Rops6g03255 645 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Rops6g03255 645 SMART serkin_6 302 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03255 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Rops6g03255 645 MobiDBLite consensus disorder prediction 620 645 - -
Rops6g03255 645 SUPERFAMILY Protein kinase-like (PK-like) 281 574 IPR011009 -
Rops6g03255 645 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 276 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03255 Rops-Chr6 56514172 56518156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03255 21 645 Receptor kinase-like Gene Family AT1G25390 49.608 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Rops6g03255 Pkinase 5.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03255 - - gmx:100305407 818.92