Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03195 ATGACTGACACCATAACAGCCACAACCGAGAAGCTTATTGAGATATATGAAGATAAGGACAATGCAAGGGAGGATGAGATTGCTGCACTGGGAGGTCAAACTGCTTCCGGAGTTAATGTTTTTAGTTCCTTCTACGATAGACTCAAAGAGATACGAGAGTATCATAGGAAGCATCCAATTGCACGTGTTGTTAGTGAAACTTTGGGATGCTTTCAAATGAAACTTTCAAATGCTGGTGGAAGGCTTATTATAGCCTCTGATGGTATTTGGGATGCTTTATCTTCTGATTTGGCTGCCAAGTCTTGTCGGGGTCATGGGTGA 321 0.4237 MTDTITATTEKLIEIYEDKDNAREDEIAALGGQTASGVNVFSSFYDRLKEIREYHRKHPIARVVSETLGCFQMKLSNAGGRLIIASDGIWDALSSDLAAKSCRGHG* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03195 106 Gene3D - 4 105 IPR036457 -
Rops6g03195 106 Pfam Splicing factor SF3a60 binding domain 34 59 IPR021966 -
Rops6g03195 106 SUPERFAMILY PP2C-like 56 104 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03195 Rops-Chr6 55676443 55676763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03195 1 64 C2H2 Transcription Factor Family AT5G06160 71.875 2.17e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03195 K12827 - zju:107414800 118.627