Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03151 ATGGCAATCCAACATCACAATGAACAACTTGAACATAATGAAAATGTTTCATCTGTCCTTGATGCTCTTTACTGTGATGAAGGAAAATGGGAAGAGGAAGAGGAAGGAGAGTTAACTGAAGAAAGTAGTGAGGTGACAACAAACAATGATGGGGTGGTGCATTTGGACACTGGTTCTCTTTTCCCTTTGCTCTTGTTGGAGCAAGACTTGTTCTGGGAAGATGAGGAACTAAACTCTCTCTTCTCTAAAGAGAAGATTCAACAAGAAACTTACTATGATCTGAAGAATGTGAATCTGGACTCTTGTCTTTCTCAGCCTCGTCGTGAGGCAGTGGAATGGATGCTTAAAGTGAATGCTCATTATGGATTCTCTGCTCTCACTGCAACACTGGCTGTTACTTACCTGGATATGTTCCTTTTAAGCTTCCATTTTCAAAGGGAGAAGCCATGGATGATCCAGCTTGTGGCTGTTACTTGCATCTCTTTGGCAGCAAAAGTTGAAGAAACTCAAGTGCCTCTTCTCTTAGACCTTCAAGTGCAAGATGCCAAATATGTGTTTGAGGCAAAGACTATTCAGAGAATGGAGCTTCTAGTGCTCTCCACACTCAAATGGAAGATGCACCCTGTGACCCCACTCTCTTTTCTAGATCACATCATAAGAAGGCTTGGATTGAAAAACCATCTTCACTGGGAGTTTCTCAGGCGCTGTGAGCATCTTCTTCTATCTGTGCTTTTAGATTCAAGATTTGTTGGTTGTCTTCCTTCTGTACTGGCCACTGCAACAATGCTACATGTTATAGACCAGATTCAACAGAATGATGGTGTGGAATACAAAAATCAGCTTCTGGGTGTTCTCAAACTTAGCAAGGAGAAAGTAGATGAATGTTATAAGGCCATTCACCAGCTCTCAAATGTTAATAATTATGGTCATAACAACACTAGTAAGCGCAAGTATGACCAAATCCCTTGCAGCCCAATTGGCGTAATTGATGCTGCTGCTTTTAGCTCTGATGGTTCCAACGATTCGTGGGCAGTGGGGTCATCATTATATTCATCACCAGAGCCTCTGTTCAAGAAGAGCAGAACCCAAGGACAACAAATGAAATTGTCACCACTTAATAGGGTCATTGTTGGAATTGTTGGCACCTCTCCTTAA 1155 0.419 MAIQHHNEQLEHNENVSSVLDALYCDEGKWEEEEEGELTEESSEVTTNNDGVVHLDTGSLFPLLLLEQDLFWEDEELNSLFSKEKIQQETYYDLKNVNLDSCLSQPRREAVEWMLKVNAHYGFSALTATLAVTYLDMFLLSFHFQREKPWMIQLVAVTCISLAAKVEETQVPLLLDLQVQDAKYVFEAKTIQRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKNHLHWEFLRRCEHLLLSVLLDSRFVGCLPSVLATATMLHVIDQIQQNDGVEYKNQLLGVLKLSKEKVDECYKAIHQLSNVNNYGHNNTSKRKYDQIPCSPIGVIDAAAFSSDGSNDSWAVGSSLYSSPEPLFKKSRTQGQQMKLSPLNRVIVGIVGTSP* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03151 384 SUPERFAMILY Cyclin-like 210 320 IPR036915 -
Rops6g03151 384 CDD CYCLIN_AtCycD-like_rpt1 107 204 - -
Rops6g03151 384 FunFam CYCLIN D32 208 297 - -
Rops6g03151 384 FunFam D3-type cyclin 100 207 - -
Rops6g03151 384 SUPERFAMILY Cyclin-like 71 207 IPR036915 -
Rops6g03151 384 Gene3D - 95 207 - -
Rops6g03151 384 Pfam Cyclin, C-terminal domain 209 320 IPR004367 -
Rops6g03151 384 Pfam Cyclin, N-terminal domain 102 206 IPR006671 -
Rops6g03151 384 PANTHER CYCLINS 75 311 IPR039361 -
Rops6g03151 384 SMART cyclin_7 112 200 IPR013763 -
Rops6g03151 384 Gene3D - 208 299 - -
Rops6g03151 384 CDD CYCLIN_AtCycD-like_rpt2 209 299 - -
Rops6g03151 384 SMART Cyclin_C_2 209 337 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03151 Rops-Chr6 54993477 54995590 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03151 1 337 Core Cell Cycle Gene Families AT4G34160 55.233 6.03e-117 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03151 K14505 - gmx:547740 615.535