Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03146 ATGGCTACTACGTTTTCAATTGGTACACACTTGTCCATGTTCCAACATTCGAGGAACTCTAGACTTTCACTTTGCACCGTTGAATTTTGGCCGACATCACGAAACTTCTTTAATTCATCTTCTTGTAGAATCAGATTTGGAGGTTCCAGTTACAGGTTGCTTCGTAATAATGTATTGGCACGTGCTGAAGATAAGGCCAGAGGTTCTTCTTCTTCTTCTTCTTCGTTTGAGCCTCAACAAAGTTCCCAGCAACAGTTCCAGAACTTGACATCAGAATCCGGAACTTGTGATCCCCTATGTTCGCTTGATGAAACAAGCTCACAAGATTTTGAAGACAACTACCAGCCCAAAACCGATTTGCTCAAAGCTGTTGCTATACTTGCAGTGGTTGCAACTGGTACAATGGCAATTAACCATTCTTGGGTGGCCGCTAATCAGGATCTTGCTATGGCATTGCTATTTGTAATAGGATATGCAGGCATCATATTTGAAGAATCTCTAGCCTTCAATAAAAGTGGAGTAGGACTATTGATGGCTGTAAGCTTATGGGTGATTCGGAGTATTGGGGCTCCATCAACTGATATTGCTGTTTCAGAGCTAACACATGCATCTGCAGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGTGCAATGACCATTGTTGAGATAGTTGATGCTCATCAAGGATTTAAACTAGTTACTGACAATATAACAACCCGAAACCCACGCCTTCTCCTCTGGGTGATTGGATTTGTTACATTTTTTGTCAGTTCAGTTCTAGACAACCTGACATCCACCATAGTGATGGTTTCTCTGTTGCGGAAATTAGTACCTCCATCAGAGTATAGAAAGATTCTTGGAGCTGTTGTTGTAATAGCAGCAAATGCTGGTGGTGCATGGACTCCTATTGGTGATGTTACCACTACTATGCTGTGGATACATGGCCAAATATCTACAGTGCAAACAATGAAGGTTTTGTTTATACCTTCAGTGCTTTCTCTAGCTGTTCCACTGGCTCTAATGTCCCTGACTAGTGAAGTTAATGGGAAGGGACAAGATTCTCCCAATGTCTTGGCATCTGAACAGATGGCTCCTCGAGGACGGCTTGTTTTCTCTGTTGGTATAGGAGCTTTGATTTTTGTCCCAGTGTTCAAGGCCCTCACAGGTTTGCCTCCGTACATGGGGATGCTGCTTGGACTTGGCGTGCTTTGGATCCTCACTGATGCTATCCATTACGGTGAATCTGAAAGGCAGAAGCTAAAAGTGCCACAGGCTCTATCGAGGATAGACACTCAAGGAGCACTATTTTTCCTGGGAATTCTATTATCCGTTAGCAGCCTGGAGGCAGCAGGGGTTCTTCGGGAAATAGCAAATTACCTTGATGCTCATATCCCGAGTAGTGAACTGATTGCAAGTGCTATTGGAGTCATATCTGCAATTATAGATAATGTTCCATTGGTTGCTGCTACGATGGGAATGTATGATCTCACGTCTTTCCCTCAAGATTCCGAGTTCTGGCAACTGATTGCACTTTGTGCTGGTACTGGGGGATCCATGTTAATTATTGGCTCAGCTGCTGGAGTTGCTTTCATGGGGATGGAAAAGGTGGACTTCTTTTGGTACCTACGAAAGATTAGTGGCTTTGCTTTTGCTGGTTATGCTGCTGGTATTGCTGCCTACTTAGCGGTCCATAACCTCATCTCCCTACCAACAACTCTAGCTGAGGTTCCTTTCCTTTCTGGCTCATAA 1749 0.4362 MATTFSIGTHLSMFQHSRNSRLSLCTVEFWPTSRNFFNSSSCRIRFGGSSYRLLRNNVLARAEDKARGSSSSSSSFEPQQSSQQQFQNLTSESGTCDPLCSLDETSSQDFEDNYQPKTDLLKAVAILAVVATGTMAINHSWVAANQDLAMALLFVIGYAGIIFEESLAFNKSGVGLLMAVSLWVIRSIGAPSTDIAVSELTHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRNPRLLLWVIGFVTFFVSSVLDNLTSTIVMVSLLRKLVPPSEYRKILGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTVQTMKVLFIPSVLSLAVPLALMSLTSEVNGKGQDSPNVLASEQMAPRGRLVFSVGIGALIFVPVFKALTGLPPYMGMLLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGVLREIANYLDAHIPSSELIASAIGVISAIIDNVPLVAATMGMYDLTSFPQDSEFWQLIALCAGTGGSMLIIGSAAGVAFMGMEKVDFFWYLRKISGFAFAGYAAGIAAYLAVHNLISLPTTLAEVPFLSGS* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03146 582 NCBIfam sodium:proton antiporter NhaD 175 404 - -
Rops6g03146 582 MobiDBLite consensus disorder prediction 68 92 - -
Rops6g03146 582 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 55 582 IPR045016 GO:0006814|GO:0015297
Rops6g03146 582 Pfam Citrate transporter 159 514 IPR004680 GO:0016020|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03146 5 582 Antiporters AT3G19490 78.238 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03146 - - gmx:100779521 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03146 6 54929511 54935260 Rops6g03146 6 54929511 54935260 ECH