Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03141 ATGAGCCTAAACTCCCAGAATCTCCATTTTTGGGGGAGAGTTTCATTCTTTCTTCTTCTACTGCTTCAATCTGTTGCTCTTAACTCTGATGGGGTTCTCTTGCTTAAATTCAAGTACTCCATCCTCAGTGACCCACTTTCAGTCTTCGAGAACTGGAACTACAATGATTTATCTCCATGTTCATGGCATGGGGTTACATGCACTGAAATTGGAGCTCCTGGTACCCCTGACTTGTTCAGAGTAACTAGCTTGGTCCTTCCAAATAGCCAGCTCCTTGGTTCCATTGCTGAAGAGTTAGGCATGATCCAATACCTTCACCATCTTGATCTCTCCAACAATTTCCTTAACGGGTCTCTACCAAACTCTATCTTCAACTCTTCTCAGCTTCAAGTGCTTTCTCTCTCCAACAATGCCATCTCTGGAGAGCTACCTGAGTTGATTGGTAAAATGACAAGTCTTCAACTTCTCAACCTTTCTGACAATGCCTTTACTGGGTTGATCCCAGAGAATCTCACTACTTTACAGAACCTAACTGTTGTTTCTCTGAAGAGTAACTATTTTTCTGGTGGAGTCCCAATTGGGTTCAACTCTGTGGAGATTTTGGATCTGTCCTCTAATTTGCTCAATGGTTCTCTTCCAAATGACTTTGGTGGTGAAAGCTTGCGTTACTTGAATCTCTCTTACAATAAGATTTCAGGAACTATACCACCAGCATTTGCTAAACAGATTCCTGAAAACTCTACAATTGACCTCTCCTTCAACAATCTTACAGGACCAATACCAAACTCTCTGGCTTTGCTCAACCAGAAAACAGATTTGTTATCTGGGAATGCTGATCTTTGTGGAAAGCCTCTGAAGATTCTGTGTACTATTCCCTCTACTATGTCCACTTCTCCACCCAATAGCACCAACACATCTTCACCAGCAATTGCAGCTATACCAAAAACAATTGACACAAACACAACAGGAACCCCAAGTGGCTCTGAGAATGTGTCACAAAGTGGCCTAAAACCTGCTACAATAGCAGCCATTGTTGTAGGAGACTTGGCTGGCATGGCCGTTTTGGCCATGATCATTGTTTTCATCTACCAAAAAAGAAAGAGAAGAGATCCAAAACCAACCACTGATTCTTCTTCTTCTGCTGCTGCTGCTGCCGCCGCCACTACCAACAACTCAGAAAAGAAAGATCCACCCTCACTTCCCTGTGCCTGCTTAACAATCAAAGAAGAAGAGACTTCAGAAGCAACAAGCTCTGACACTGACAATGAGAACACCACCGTTGACATCACAGCACAAAACGAGAATCTTCCAAAAGAAGGCACTCTTGTAACCGTGGACGGTGAAACGAAGCTGGACCTGGATACTTTGCTTAAAGCTTCAGCTTATATCCTTGGAACAAGCCATGTGAGCATAGTGTACAAGGCAGTGCTTCAAGATGGAAGAACCTTTGCTGTTAGAAGAATTGGTGAGTGTGGTATTGAGAGAATGAAGGACTTTGAAAACCAAGTAAGGGCCATTGCAAAACTTCGCCACCCAAATTTGGTCAAAGTTCGTGGCTTCTGTTGGGGTGAAGATGAGAAGCTTGTAATCTGTGACCATGTTCCAAATGGCAACCTCGCTAGCATTGGTTATAGAAGAGCAGGTTCATCTCCTATAAACTTGTCCTTGGAGTTGCGGTTGAAGATAGCAAAAGGGGTTGCAAGAGGCTTGGCCTTCATTCATGAGAAGAAACACGTGCATGGCAATGTTAAACCAAGCAACATCTTGTTAAACTCAGAAATGGAACCTATCATAAGTGATTTTGGGCTAGACCGGCTCCTCTTGAATGACATAAACCACAGAGCAAACGGTTCAGCTAGGCAATTAATGGTGAACCAAAGAGCCCAACAAGACCTCACCAATGGTTCAAGTTCAAGCCCCTTTGCACCAACAATGGGACCATCACCATCATCATCTAGTGGGGTCCAAGTGCCTTATCAAGCACCAGAGTCACTTCAAAACATCAAAGCAACCCCCAAATGGGATGTGTATTCTTTTGGCATTGTCTTACTTGAGCTTCTAACTGGGAGGGTTCTCTTGGACCAGGAGTTAGACCAATGGCCTGCAACCGGTTCAGTTGAAGAGGAAAAAAACCGGGTCTTGAGGCTTGCTGACGTGGCCATCAAGCCTGAGATTGAAGGCAGAGAAAATGTCATATTGGCTTGCTTCAAGTTGGGGCTTAACTGTGCTTCTCTTGCCCCACAAAAGAGACCTTCAATGAAAGAGGCTCTACAAATCTTAGAGAAGATCCCTGCTATTATTTCTTCATGA 2310 0.4381 MSLNSQNLHFWGRVSFFLLLLLQSVALNSDGVLLLKFKYSILSDPLSVFENWNYNDLSPCSWHGVTCTEIGAPGTPDLFRVTSLVLPNSQLLGSIAEELGMIQYLHHLDLSNNFLNGSLPNSIFNSSQLQVLSLSNNAISGELPELIGKMTSLQLLNLSDNAFTGLIPENLTTLQNLTVVSLKSNYFSGGVPIGFNSVEILDLSSNLLNGSLPNDFGGESLRYLNLSYNKISGTIPPAFAKQIPENSTIDLSFNNLTGPIPNSLALLNQKTDLLSGNADLCGKPLKILCTIPSTMSTSPPNSTNTSSPAIAAIPKTIDTNTTGTPSGSENVSQSGLKPATIAAIVVGDLAGMAVLAMIIVFIYQKRKRRDPKPTTDSSSSAAAAAAATTNNSEKKDPPSLPCACLTIKEEETSEATSSDTDNENTTVDITAQNENLPKEGTLVTVDGETKLDLDTLLKASAYILGTSHVSIVYKAVLQDGRTFAVRRIGECGIERMKDFENQVRAIAKLRHPNLVKVRGFCWGEDEKLVICDHVPNGNLASIGYRRAGSSPINLSLELRLKIAKGVARGLAFIHEKKHVHGNVKPSNILLNSEMEPIISDFGLDRLLLNDINHRANGSARQLMVNQRAQQDLTNGSSSSPFAPTMGPSPSSSSGVQVPYQAPESLQNIKATPKWDVYSFGIVLLELLTGRVLLDQELDQWPATGSVEEEKNRVLRLADVAIKPEIEGRENVILACFKLGLNCASLAPQKRPSMKEALQILEKIPAIISS* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03141 769 MobiDBLite consensus disorder prediction 629 658 - -
Rops6g03141 769 SUPERFAMILY Protein kinase-like (PK-like) 463 763 IPR011009 -
Rops6g03141 769 SUPERFAMILY L domain-like 31 287 - -
Rops6g03141 769 CDD STKc_IRAK 464 763 - -
Rops6g03141 769 MobiDBLite consensus disorder prediction 375 396 - -
Rops6g03141 769 MobiDBLite consensus disorder prediction 418 433 - -
Rops6g03141 769 ProSiteProfiles Protein kinase domain profile. 458 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03141 769 Gene3D Ribonuclease Inhibitor 27 194 IPR032675 -
Rops6g03141 769 Pfam Protein kinase domain 463 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03141 769 CDD TM_EGFR-like 340 369 - -
Rops6g03141 769 ProSiteProfiles Leucine-rich repeat profile. 128 150 IPR001611 GO:0005515
Rops6g03141 769 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Rops6g03141 769 MobiDBLite consensus disorder prediction 369 433 - -
Rops6g03141 769 Gene3D Phosphorylase Kinase; domain 1 427 533 - -
Rops6g03141 769 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 27 191 - -
Rops6g03141 769 FunFam Leucine-rich repeat receptor-like protein kinase 197 291 - -
Rops6g03141 769 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 196 764 IPR046959 -
Rops6g03141 769 Gene3D Ribonuclease Inhibitor 195 291 IPR032675 -
Rops6g03141 769 Pfam Leucine Rich Repeat 105 123 IPR001611 GO:0005515
Rops6g03141 769 Pfam Leucine Rich Repeat 220 240 IPR001611 GO:0005515
Rops6g03141 769 Gene3D Transferase(Phosphotransferase) domain 1 534 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03141 Rops-Chr6 54887013 54890049 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03141 26 763 Receptor kinase-like Gene Family AT2G15300 51.108 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops6g03141 Pkinase 8.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03141 - - gmx:100820334 1107.82