Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03135 ATGGGTAGCATTGAAGGGGAAAGAACAACAGTGGGATGGGCAGCAAGAGATCCTTCAGGGATTCTCTCTCCATACAACTACACTTTGAGAAACACAGGCCCTGATGATGTTTATATTAAAGTTCACTATTGTGGAATTTGCCATTCTGATCTCCACCAAATTAAGAATGATCTTGGCATGTCCAATTATCCCATGGTCCCTGGGCATGAAGTGGTTGGTGAAGTACTCGAGGTGGGTTCAAATGTTACCAGGTTCAGAGTGGGAGAAATAGTAGGAGCTGGACTCCTTGTTGGGTGCTGCAAAAACTGCAGGGCTTGCGAATCTGATATTGAACAATATTGCAGCAAGAAGATCTGGTCTTACAATGATGTTTATACAGATGGAAGACCCACACAGGGTGGCTTTGCTGAAACCATTATCGTTGAACAGAAGTTTGTTGCCAAAATACCAGAGGGTATGGCCCCAGAGCAAGTGGCACCATTGTTGTGTGCTGGTGTGACTGTGTACAGTCCACTGTCACATTTTGGATTGAAAGAGAGTGGGCTGAGAGGAGGAATATTGGGGCTTGGAGGAGTGGGACACATGGGGGTGATGATAGCAAAGGCATTTGGTCACCATGTGACTGTGATAAGCTCTTCTGATAAGAAGAAACAGGAGGCTCTTGAGCACCTTGGAGCTGATGCATACTTGGTTAGTTCAGATACCAATGGCATGAAGGAAGCTGCTGAATCACTTGATTATATCATTGACACTGTGCCTGTTGGTCACCCTCTTGAACCTTATCTTTCATTGCTCAAAATTGATGGGAAGTTGATCTTGATGGGTGTCATAAACACCCCTTTGCAATTTGTTTCCCCTATGGTCATGCTAGGGAGGAGGTCAATCACTGGAAGTTTCATAGGGAGCATGAAGGAGACAGAGGAGATGCTAGAGTTCTGGAAAGAGAAGGGTCTGAGTTCAATGATTGAAATTGTGACTATGGATTATATCAACAAAGCTTTTGAAAGATTGGAGAACAATGATGTGAGATATAGGTTTGTTGTGGATGTCAAAGGCAGCAAACTTCATGAGTAA 1074 0.4395 MGSIEGERTTVGWAARDPSGILSPYNYTLRNTGPDDVYIKVHYCGICHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVTRFRVGEIVGAGLLVGCCKNCRACESDIEQYCSKKIWSYNDVYTDGRPTQGGFAETIIVEQKFVAKIPEGMAPEQVAPLLCAGVTVYSPLSHFGLKESGLRGGILGLGGVGHMGVMIAKAFGHHVTVISSSDKKKQEALEHLGADAYLVSSDTNGMKEAAESLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFVSPMVMLGRRSITGSFIGSMKETEEMLEFWKEKGLSSMIEIVTMDYINKAFERLENNDVRYRFVVDVKGSKLHE* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03135 357 SUPERFAMILY GroES-like 16 181 IPR011032 -
Rops6g03135 357 FunFam Cinnamyl alcohol dehydrogenase 164 320 - -
Rops6g03135 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Rops6g03135 357 PANTHER ALDEHYDE REDUCTASE 8 352 IPR047109 GO:0016616
Rops6g03135 357 FunFam probable cinnamyl alcohol dehydrogenase 13 170 - -
Rops6g03135 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Rops6g03135 357 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Rops6g03135 357 Gene3D - 164 320 - -
Rops6g03135 357 Gene3D - 13 350 - -
Rops6g03135 357 CDD CAD1 11 349 IPR047109 GO:0016616
Rops6g03135 357 Pfam Zinc-binding dehydrogenase 191 312 IPR013149 -
Rops6g03135 357 Pfam Alcohol dehydrogenase GroES-like domain 34 149 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03135 Rops-Chr6 54846779 54848772 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03135 1 357 Monolignol Biosynthesis Gene Families AT3G19450 76.816 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03135 K00083 - gmx:100777558 630.172