Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03088 ATGAGAAGTTTCTCCGGGGATGTTATTTCAAGAGCATGCTTTGGAAGCAATTATTTCAAGGGGGAAGAAATTTTCTTGAAACTCAGAGCTCTCCAAGAGGTCTTGTCTTGGAAAAATATGTCCAAAGAGGTCCCTGGCATGAGATACCTTCCAACAAAGACCAATAGAGAAACATGGGCATTAGAAAAGGAAGTGAGAAGTTTGATACTTCAGGTGGTGAAGGAAAGAAAGGAAACCAATTCTGGAAAAGACCTGCTGCAAGTGGTTCTTGAAGGTGCTGAGAGAAGTAATCTCACTCAAGAGGCCATGGACTGTTTTATTGTGGATAACTGCAAGAATATATACTTGGCAGGCTATGAGACAACTGCAGTTGCTGCTACATGGTGCCTCATGTTGTTGGCCTCAAATCAAAATTGGCAAGATCGTGTTCGTGCTGAGGTCCTAGAAATTTGCAAGGGTAGAATCCCGGATTTTGATATGCTTTGTAAGATGAAGCAGCTTACAATGGTTATTCATGAATCCTTGCGCCTTTATCCCCCTGTAACTGTGATGTCAAGGGAAGTCTTCAAGGACATGAAATTTGGGAATATTGATGTTCCTAAGGGCCTTAACCTTTGGATAATGGTTCTAAATATGCACACAAATCCAGATGTTTGGGGAGCTGACGCCTACAAATTCAATCCAGAAAGATTTGCCAATGGAACCACAGGTGCTTGTAAGCTGCCACACGTGTATATGCCCTTTGGGATTGGCCCACGAGTGTGTCTTGGACAGAACTTGGCTATGGTTGAACTTAAGATGATGATAGCTCTCATCTTGTCTAATTTCACTTTCTCCCTCTCCCCTCGATACATCCATTCACCTACTCTTAGTTTGCTCATTGAGCCTGAGCATGGAGTCCATCTCTTAGTAAGAAAGCTATGA 924 0.4264 MRSFSGDVISRACFGSNYFKGEEIFLKLRALQEVLSWKNMSKEVPGMRYLPTKTNRETWALEKEVRSLILQVVKERKETNSGKDLLQVVLEGAERSNLTQEAMDCFIVDNCKNIYLAGYETTAVAATWCLMLLASNQNWQDRVRAEVLEICKGRIPDFDMLCKMKQLTMVIHESLRLYPPVTVMSREVFKDMKFGNIDVPKGLNLWIMVLNMHTNPDVWGADAYKFNPERFANGTTGACKLPHVYMPFGIGPRVCLGQNLAMVELKMMIALILSNFTFSLSPRYIHSPTLSLLIEPEHGVHLLVRKL* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03088 307 PANTHER CYTOCHROME P450 FAMILY MEMBER 2 299 - -
Rops6g03088 307 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 248 257 IPR017972 GO:0005506|GO:0016705
Rops6g03088 307 PRINTS E-class P450 group I signature 168 186 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03088 307 PRINTS E-class P450 group I signature 106 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03088 307 PRINTS E-class P450 group I signature 209 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03088 307 PRINTS E-class P450 group I signature 245 255 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03088 307 PRINTS E-class P450 group I signature 4 22 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03088 307 PRINTS E-class P450 group I signature 255 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03088 307 PRINTS E-class P450 group I signature 126 152 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03088 307 Pfam Cytochrome P450 4 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03088 307 PRINTS P450 superfamily signature 246 255 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03088 307 PRINTS P450 superfamily signature 255 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03088 307 PRINTS P450 superfamily signature 169 180 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03088 307 PRINTS P450 superfamily signature 117 134 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03088 307 SUPERFAMILY Cytochrome P450 2 305 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03088 307 Gene3D Cytochrome P450 1 307 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03088 Rops-Chr6 54054509 54055898 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03088 1 304 Cytochrome P450 AT5G24900 44.937 9.89e-99 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03088 K24544 - gmx:100785420 535.798