Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03050 ATGGAGGAGGGGAGTGACGCGTCTTCGCAGGCACGCCAAACTCGCCGCCGGATACGGAGCTCCGGTGAAAATATCAGGGTTGATGAGCTTCAGCAACAACAAAATCTGAGAATGACTTATTTGACCCACTACAAGAAGGAGCATGTGCGGACTAACACTTATGACGCTGCAATCAAGCATCATCGAAATGCTATTAAAAACAAAGTTGTACTTGATGTTGGATGCGGTACCGGCATCCTTTCTATATTTTGCGCTAAGGCTGGTGCAAAGCGGGTGTTTGCAGTTGAAACAAGTCACATGGCCAGGCGGGTGGAAAGTATTGTTCAAGCAAATAATCTTTCAAACATTGTTACGGTATTGCATGGACAAATTAAGGATGTTGATCTCAAGGAAAAGGTCGATGTTATAGTTTCAGATTGGATGGGCTCTATGCTTCTATATGAGAGCATGCTTGGAAGTGTTATTCTTGCCAGAGATCGCTGGCTCAAACCGGGAGGTCTAATGCTTCCTTCAAATGCAATGTTGTACGTGGCTCCTTTCACATATTCTAACAAATACCTTGAAGAAGTTGACTGCTGGCTTGATGTTCATGGAATCAATATGTCAGCCATGATACCATTAGCAAAACAAATTGCTTTTGAAGAACCTTCCGTGGAGACAATTACCAATCAAAATATTTTGGCATCGTCACAAGTGGTGAAATACATCGACTGTTATTCTATTACCATTCCTCAGCTACAATCTATAATAGCAAGTTTTAAGTTCAACTCAAGGATTCCAGCATCACTACATGGTTTTGCCTTTTGGTTTGATGTTGACTTTAGTGGGGTTGTATCAACTTCAGCTGTTGACTACCATCTAGAGGACCGTCAGAGAAGAAATCGGACAAACCCTAATGATGCACCACCGCTCTTGTCCACTTCGCCTGAACACCCACCAACACATTGGAAACAGACCTTGATATACCTTTATGAATCAATAGAGGTGGCAGAAAATCAACTTATTGAAGGTTCAGTGACATTGTCACAAGGACAAGAAAATGTCCAGTTTCTGAATGTCGACCTCGAATTCATCGTAGGCGATCAATCCTATGTGAGAAATGTTGTTATGAGATGA 1116 0.422 MEEGSDASSQARQTRRRIRSSGENIRVDELQQQQNLRMTYLTHYKKEHVRTNTYDAAIKHHRNAIKNKVVLDVGCGTGILSIFCAKAGAKRVFAVETSHMARRVESIVQANNLSNIVTVLHGQIKDVDLKEKVDVIVSDWMGSMLLYESMLGSVILARDRWLKPGGLMLPSNAMLYVAPFTYSNKYLEEVDCWLDVHGINMSAMIPLAKQIAFEEPSVETITNQNILASSQVVKYIDCYSITIPQLQSIIASFKFNSRIPASLHGFAFWFDVDFSGVVSTSAVDYHLEDRQRRNRTNPNDAPPLLSTSPEHPPTHWKQTLIYLYESIEVAENQLIEGSVTLSQGQENVQFLNVDLEFIVGDQSYVRNVVMR* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03050 371 Gene3D - 172 369 - -
Rops6g03050 371 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 23 354 IPR025799 GO:0016274|GO:0018216
Rops6g03050 371 MobiDBLite consensus disorder prediction 289 312 - -
Rops6g03050 371 CDD AdoMet_MTases 70 169 - -
Rops6g03050 371 Pfam Ribosomal protein L11 methyltransferase (PrmA) 66 144 - -
Rops6g03050 371 Gene3D Vaccinia Virus protein VP39 6 170 IPR029063 -
Rops6g03050 371 MobiDBLite consensus disorder prediction 1 23 - -
Rops6g03050 371 FunFam Protein arginine N-methyltransferase 6 32 170 - -
Rops6g03050 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 46 357 IPR029063 -
Rops6g03050 371 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 46 357 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03050 Rops-Chr6 53665996 53674996 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03050 47 338 C2H2 Transcription Factor Family AT3G12270 35.179 1.47e-49 174