Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03049 ATGTTATCAGAGTTGATGAACTTTTTGAGGGCCTGCTTTCGGCCGGGTTCAGGTGGATATGCACGCACGAGTTCAGATGGTGGAGGCAATTTGTGCTCCAATGAGTCTGGCCCTTATGGAACCTTTATTGGTGTCTATGATGGGCATGGAGGGCCTGAGACATCACGGTTTATCAATAATCACCTATTTCACCATCTCAAGAGATTTACTTCAGAGCAACAATCAATGTCAGTGGATGTAATTCGCAAGGCATTCCAAGCAACAGAAGAAGGGTTTATGTCAGTGGTTGCCAGACAATGGTCAATAACACCGCAAATTGCAGCTGTTGGGTCATGCTGTCTTGTTGGTGTTATTTGTAATGGAACCCTTTATATAGCAAATGCTGGTGATTCCCGGGCTGTTTTGGGAAGAGTAGTCAAGGCAACTGGCCAGGTTTTAGCCATGCAGTTATCAACAGAGCACAATGCATCGATAGAGTCTATAAGACAGGAGCTCCATTCTCTGCACCCTGATGATTCAAATATTGTTGTTTTAAAGCATAATGTATGGCGTGTGAAGGGCCTTATTCAAGGAAGTGCAAGGAGGCTGGTGAAAGCTGCACTTCAAGAAGCAGCAAAGAAGAGAGAAATGAGATATTCAGATTTAAAGAAAATTGACCGTGGAGTTCGTCGGCATTTCCATGATGACATCACTGTGATTGTTGTGTTTCTTGACTCAAATCTCATGAGTAGGGCAAGCACTGTCAAGTTCCCTAGTATTTCTGTCAGAGGGGCCGGTATTAACCTGCCTCATAACACATTGGCACCAATCTCTGGTGGTGCCTGA 825 0.4448 MLSELMNFLRACFRPGSGGYARTSSDGGGNLCSNESGPYGTFIGVYDGHGGPETSRFINNHLFHHLKRFTSEQQSMSVDVIRKAFQATEEGFMSVVARQWSITPQIAAVGSCCLVGVICNGTLYIANAGDSRAVLGRVVKATGQVLAMQLSTEHNASIESIRQELHSLHPDDSNIVVLKHNVWRVKGLIQGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLMSRASTVKFPSISVRGAGINLPHNTLAPISGGA* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03049 274 SUPERFAMILY PP2C-like 39 238 IPR036457 -
Rops6g03049 274 PANTHER PROTEIN PHOSPHATASE 34 190 IPR015655 GO:0004722|GO:0006470
Rops6g03049 274 ProSitePatterns PPM-type phosphatase domain signature. 42 50 IPR000222 GO:0043169
Rops6g03049 274 Gene3D - 189 239 IPR036457 -
Rops6g03049 274 Pfam Protein phosphatase 2C 33 159 IPR001932 -
Rops6g03049 274 ProSiteProfiles PPM-type phosphatase domain profile. 20 237 IPR001932 -
Rops6g03049 274 Gene3D - 30 188 IPR036457 -
Rops6g03049 274 CDD PP2Cc 32 237 IPR001932 -
Rops6g03049 274 SMART PP2C_4 6 235 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03049 Rops-Chr6 53657826 53660252 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03049 166 263 PP2C-type Phosphatase Gene Family AT3G51370 52.294 7.83e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03049 - K01102 gmx:100794801 323.939