Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03041 ATGTTCTCAAATTCTCAGTCAAAAGCTACAGTAATATTGGATTTGGGATCATATAGTTGGGAAAGCATCTGCTGCAACTGGAACCTATTAGTGGTGGAGGAATCCAGAGATAAGTCTGTCAAGTTTAATTGCCAAGTAAATGAATTTGTTATCGAATTTGTCTGTGTCTCTCCCTTTTTTAAGAGTTTGGATGTAGAGGTTACTGGGAGCAAGTCATCTTCTGAAGACAAGACAGAGTTTCTACCCATATTTCGGTCAGGAAGTTGTGCTGAAAGAGGAGGTAAACAATATATGGAAGATGAACACATTTGTGTAGATGACCTTATTCCACATATAGCTTCTTCTTCAAATATTCCTTTACCAGGAGCTTTCTATGGGGTGTTCGATGGTCATGGAGGTACAGATGCAACTTTGTTCGTAAGAAATAACATCCTTAGATTCATAGTTGAGGACTCCCATTTTCCAACTTGCGTGGGGAAGGCGATTACAAGTGCATTTCTGAAAGTTGATTATGCATTTGCAGATTCTAGTTCGCTTGATATCTCCTCTGGCACCACTGCTTTAACTGCTCTTGTATTTGGAAGGACCATGATAATTGCCAATGCCGGGGATTGTCGAGCTATCCTGGGGAGGCGAGGTAGAGCAATTGAGATGTCAAAAGACCAGAAACCAAATTGCATTTCAGAAAGGCTAAGGATTTAG 702 0.4046 MFSNSQSKATVILDLGSYSWESICCNWNLLVVEESRDKSVKFNCQVNEFVIEFVCVSPFFKSLDVEVTGSKSSSEDKTEFLPIFRSGSCAERGGKQYMEDEHICVDDLIPHIASSSNIPLPGAFYGVFDGHGGTDATLFVRNNILRFIVEDSHFPTCVGKAITSAFLKVDYAFADSSSLDISSGTTALTALVFGRTMIIANAGDCRAILGRRGRAIEMSKDQKPNCISERLRI* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03041 233 CDD PP2Cc 84 233 IPR001932 -
Rops6g03041 233 Gene3D - 77 233 IPR036457 -
Rops6g03041 233 ProSiteProfiles PPM-type phosphatase domain profile. 85 233 IPR001932 -
Rops6g03041 233 Pfam Protein phosphatase 2C 86 233 IPR001932 -
Rops6g03041 233 PANTHER PROTEIN PHOSPHATASE 2C 74 233 IPR015655 GO:0004722|GO:0006470
Rops6g03041 233 SUPERFAMILY PP2C-like 79 233 IPR036457 -
Rops6g03041 233 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Rops6g03041 233 SMART PP2C_4 75 233 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03041 Rops-Chr6 53513930 53528115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03041 73 233 PP2C-type Phosphatase Gene Family AT2G33700 73.913 1.65e-85 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03041 K14803 - gmx:100778015 315.849