Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03004 ATGCTTGCCAGTGAGGTTCTGATGAGCTTTGCTGAGCTGAAAAACTTGACCCTATATGCCACCGACCTTGTCAGTTTTCAACCAAAGGAGGGGCAGTGTTTTTTGGATGTGGTGATGGTGGTAATGCTACTGGAGGCGACGATGATAGTGGTGAGGGAGATGGTGGCGGTGGTGAGGACGGGAGAAGAGGTGGAAAATAAACCGGTGGTGATGGTGGTGATAAAAGTGGAGCAAGTGACAGAGAATATATTGTTGGGGGCAGTGAAGCTTCCCTCTCCTTCTTCAGGAAAAAACAATATCTCTTTAATTGTTGCGATTGTTGTCCCAATTGTTGTTGCCGTGGCACTTTTCATTCTCGGCTGCTGCTTCCTGCGAAAGAGGGCAAGCAAGAAGTATAATAGTTTCATCTCCAATTCAATTCGGGAGGATCTCGCAGATGCAGAGTCCTTGCAATTTGACTTGACTACACTTGAAGCTGCCACAAACTGCTTCTCTGATGAGAACAAGATTGGCCAAGGTGGATTTGGTGTGGTTTATAAGGGTATCCTCCCTAACGGACAGGAGATTGCTGTGAAGAGGCTGTCATTAACCTCCTTGCAGGGTGCACTGGAGTTCAGGAATGAAGCTGCCCTTGTGGCCAAACTTCAACACAGAAATTTAGTGAGGCTATTGGGATTTTGCTTGGAGGGGCGCGAGAAAATGCTTGTGTATGAATACATACCAAACAAAAGTCTTGATCACATTCTATTTGATCCTGTAAAGCAGAGAGAATTAGATTGGTCAAGACGCTACAATATTATAGTTGGCATTGCTCGAGGAATTCTTTATCTCCATGAAGATTCCCAGCTTAGAATTATACATCGTGATCTGAAAGCTAGCAATGTTTTGTTAGATGAAAATATAAACCCAAAGATTTCAGATTTTGGCATGGCAAAAATTTTCCAGGCAGATCAGACTCAAGTAAACACAGGAAGGATTGTTGGGACTTATGGCTACATGTCTCCAGAATATGCAATGCGTGGACAGTTCTCTGTGAAATCAGATGTGTTCAGCTTTGGTGTCCTAGTTTTGGAGATTGTGAGTGGCAAGAAGAACACTGAGTTTTATCAAACGAATCATGCTGATGACCTCTTAAGCTATGCTTGGAAGGTTTGGACGGAGAAAACACCTTTGGAGTTGTTGGATCCAGCACTTAGAGTTCGGGAGGATCTTGCTGATGTAGAGTCCTTGCAATTTGACTTGGCTACACTCGAAGCTGCCACAAACTGCTTCTCCGATGAGAACAAGATTGGCCAAGGTGGATTTGGTGTGGTTTATAATGGTATCCTCCCTAACGGACAAGAGATAGCTGTGAAGAGGCTGTCATTAACCTCCTTGCAGGGTGCACTAGAGTTCAGGAATGAAGCTACTCTGGTGACCAAGCTTCAACACAGAAATTTAGTGAGGGTATTGGGATTTTGCTTGGAGGGGAGCGAGAAGATGCTTGTGTATGAATACATACCAAACAAAAGTCTTGATCACTTCTTATTTGATCCTGTAAAGCAGAGAGAATTAGATTGGTCAAGACGCTACAAGATTATAGTTGGCATTGCTCGAGGAATTCTTTATCTCCATGAAGATTCCCAGCTTAGAATTATACATCGTGATCTGAAAGCTAGCAATGTTTTATTAGATGAAAATATGAATCCAAAGATTTCAGATTTTGGCATGGCAAAAATTTTCCAAGCAGATCAGACACAATTAAGTTCTGCAAAAGAATTATTTTCTTTCCTAAAATGTTACCATTCTGTTTTGAATATGCCAATTATAATGTTGTTTTTCAACGGTTACATGTCTCCAGAATATGCAATGCGTGGACAGTTCTCTGTGAAATCAGATGTGTTCAGCTTTGGTGTCCTAGTTTTGGAGATTGTGAGTGGCAAGAAGAACACTGATTTTTATCAAACGAATCATGCTGATGACCTCTTAAGCTATGCTTGGAAGGTTTGGACGGAGAAAACACCTTTGGAGTTGTTGGATCCAGCACTTAGAGGTTCTTATTCAAGAAATGAAGTCATCAGATGCATCCATATTGGTTTATTGTGTGTTCAGGAAAATCCATCTGACAGGCCTTCGATGGCAACTATTGGACTTATGTTGAACAGTTATTCAGTTACCATGTCATTACCAAGACAGCCAGCATCTTTCATCCATAGAAGAACACCTGACAGGCTAAAGCATGGGCTTGATTCTTCTGATCAGTCTACCTCATGTTCAATTCCATGGTCTGTGAATGAAGTATCCATTACTGAAGTATACCCTCGATAA 2307 0.4192 MLASEVLMSFAELKNLTLYATDLVSFQPKEGQCFLDVVMVVMLLEATMIVVREMVAVVRTGEEVENKPVVMVVIKVEQVTENILLGAVKLPSPSSGKNNISLIVAIVVPIVVAVALFILGCCFLRKRASKKYNSFISNSIREDLADAESLQFDLTTLEAATNCFSDENKIGQGGFGVVYKGILPNGQEIAVKRLSLTSLQGALEFRNEAALVAKLQHRNLVRLLGFCLEGREKMLVYEYIPNKSLDHILFDPVKQRELDWSRRYNIIVGIARGILYLHEDSQLRIIHRDLKASNVLLDENINPKISDFGMAKIFQADQTQVNTGRIVGTYGYMSPEYAMRGQFSVKSDVFSFGVLVLEIVSGKKNTEFYQTNHADDLLSYAWKVWTEKTPLELLDPALRVREDLADVESLQFDLATLEAATNCFSDENKIGQGGFGVVYNGILPNGQEIAVKRLSLTSLQGALEFRNEATLVTKLQHRNLVRVLGFCLEGSEKMLVYEYIPNKSLDHFLFDPVKQRELDWSRRYKIIVGIARGILYLHEDSQLRIIHRDLKASNVLLDENMNPKISDFGMAKIFQADQTQLSSAKELFSFLKCYHSVLNMPIIMLFFNGYMSPEYAMRGQFSVKSDVFSFGVLVLEIVSGKKNTDFYQTNHADDLLSYAWKVWTEKTPLELLDPALRGSYSRNEVIRCIHIGLLCVQENPSDRPSMATIGLMLNSYSVTMSLPRQPASFIHRRTPDRLKHGLDSSDQSTSCSIPWSVNEVSITEVYPR* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03004 768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 545 557 IPR008271 GO:0004672|GO:0006468
Rops6g03004 768 ProSiteProfiles Protein kinase domain profile. 164 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03004 768 FunFam Os07g0541700 protein 500 587 - -
Rops6g03004 768 SUPERFAMILY Protein kinase-like (PK-like) 409 739 IPR011009 -
Rops6g03004 768 FunFam Cysteine-rich receptor-like protein kinase 10 125 239 - -
Rops6g03004 768 Gene3D Phosphorylase Kinase; domain 1 125 239 - -
Rops6g03004 768 Pfam Protein tyrosine and serine/threonine kinase 427 709 IPR001245 GO:0004672|GO:0006468
Rops6g03004 768 Pfam Protein tyrosine and serine/threonine kinase 167 367 IPR001245 GO:0004672|GO:0006468
Rops6g03004 768 CDD STKc_IRAK 430 714 - -
Rops6g03004 768 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 406 765 - -
Rops6g03004 768 ProSiteProfiles Protein kinase domain profile. 469 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03004 768 FunFam Os07g0555700 protein 600 719 - -
Rops6g03004 768 ProSitePatterns Protein kinases ATP-binding region signature. 430 452 IPR017441 GO:0005524
Rops6g03004 768 Gene3D Phosphorylase Kinase; domain 1 430 500 - -
Rops6g03004 768 ProSitePatterns Protein kinases ATP-binding region signature. 170 192 IPR017441 GO:0005524
Rops6g03004 768 SUPERFAMILY Protein kinase-like (PK-like) 149 401 IPR011009 -
Rops6g03004 768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Rops6g03004 768 Gene3D Transferase(Phosphotransferase) domain 1 240 429 - -
Rops6g03004 768 Gene3D Transferase(Phosphotransferase) domain 1 501 724 - -
Rops6g03004 768 SMART serkin_6 164 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03004 768 SMART serkin_6 424 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03004 768 FunFam Cysteine-rich receptor-like protein kinase 10 391 499 - -
Rops6g03004 768 FunFam cysteine-rich receptor-like protein kinase 10 240 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03004 Rops-Chr6 53039216 53059779 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03004 398 768 Receptor kinase-like Gene Family AT4G11530 57.796 3.31e-145 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops6g03004 PK_Tyr_Ser-Thr 2.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03004 - - egt:105968348 641.728