Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02966 ATGCAACTTGATTTGGAGTCCTTGTCAGAAGCTACTTCTGGAGCCATTGGATCCCTTGTTAGCACCACCGTCTTGTACCCTCTTGATACTTGCAAGACCAAATATCAAGCTGAAGTTCAAGCTAAGCATCAGCGCAAATATAGGAGAATTTCTGATGTTTTATGGGAAGCAATTTCTACCCGTCAGGTGCTTTCATTGTACCAAGGCCTTGGGACAAAAAACGTCCAGTCCTTCATTTCCTCGTTTATTTATTTCTATGGATACAGCTACTTTAAGAGGCTATATTTGAAAAAAACTGGAAAGAAAAACATTGGAACAACAGCAAACCTCATTGTTGCTACTGCAGCTGGGGTTGGTACAATACTATTAACACAGCCATTAGATACAGCATCCTCAAGGATGCAGACAAGTGAATTTGGAAAATCAAAGGGTTTCTGGGAGACCCTTTCAGAGGGTACATGGAGTGAGGCATTTGACGGTCTTGGCATATCTATTCTTTTAACATCAAACCCATCTATTCAGTATACTGCATTCGATCAGCTGAAACAGAGACTGCTAAAGGGCAAGATGAGCAACAAAACAGGTACAAAGTCATCCCCGGAAGCACTTTCTGCATTTTCTGCTTTCATGCTGGGTGCAGTTTCAAAATGTGCTGCTACGTGCTTGACATACCCAGCTATCAGGTGTAAGGTCATGATTCAAGCTGCTGATTCAGATGATGATAAGAGGACAGAAGCTGAGAGGAAGGCACAGAGGACAATCTCTGGAGCACTCTATACTATCTGGAGAAGAGAAGGCCTGTTAGGGTTTTTTAAGGGATTACAGGCACAGATATTGAAAACTGTTCTCAGCGCTGCATTACTTCTGATGGTAAAGGAGAAGATTACAAAATCCACATGGATTCTGATGCTCATGATCGGAAGATACCTGTCTGTCAATCACCCCAAATTGAAAGCAGCTTGA 963 0.4226 MQLDLESLSEATSGAIGSLVSTTVLYPLDTCKTKYQAEVQAKHQRKYRRISDVLWEAISTRQVLSLYQGLGTKNVQSFISSFIYFYGYSYFKRLYLKKTGKKNIGTTANLIVATAAGVGTILLTQPLDTASSRMQTSEFGKSKGFWETLSEGTWSEAFDGLGISILLTSNPSIQYTAFDQLKQRLLKGKMSNKTGTKSSPEALSAFSAFMLGAVSKCAATCLTYPAIRCKVMIQAADSDDDKRTEAERKAQRTISGALYTIWRREGLLGFFKGLQAQILKTVLSAALLLMVKEKITKSTWILMLMIGRYLSVNHPKLKAA* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02966 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Rops6g02966 320 FunFam Peroxisomal adenine nucleotide carrier 1 3 299 - -
Rops6g02966 320 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 319 IPR045900 GO:0005347|GO:0006635|GO:0015217
Rops6g02966 320 Pfam Mitochondrial carrier protein 203 297 IPR018108 -
Rops6g02966 320 Pfam Mitochondrial carrier protein 103 187 IPR018108 -
Rops6g02966 320 Pfam Mitochondrial carrier protein 7 98 IPR018108 -
Rops6g02966 320 SUPERFAMILY Mitochondrial carrier 8 294 IPR023395 -
Rops6g02966 320 Gene3D Mitochondrial carrier domain 4 299 IPR023395 -
Rops6g02966 320 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
Rops6g02966 320 PRINTS Mitochondrial carrier protein signature 113 135 IPR002067 GO:0055085
Rops6g02966 320 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Rops6g02966 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 298 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02966 Rops-Chr6 52565602 52573662 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02966 23 308 Chloroplast and Mitochondria Gene Families AT1G25380 28.383 2.67e-13 68.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02966 6 52565602 52573662 Rops6g02966 6 52565602 52573662 ECH