Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02952 ATGGCTTCCACGATACCCACCTCCTCCACCGATACTAAAGAGGTTGTTGCAGAGATTCCTTCCTATATCCGAGTCTTCAAAGATGGCACCGTAGAACGGCCACGACAAACACCAACAGTGCCACCCTCACTCGACGACCCACGAACTGGAATCTCATCGAAAGACATCATCATCTCTCATGACCCCACAGTCTCTGCTCGCCTTTACCTTCCAAAACTACACCAAACCGAGAAAGTTTCCATCTTGGTCTACTTCCATGGTGGTGGATTCTTCTTTGAATCTGCTTTCTCTCAACTCTACCATGACCATTTCAACAGCTTTGTTTCACAAACAAATGTTATAGTTGTTTCTGTTGAGTACAGGCTTGCTCCAGAGTACCCTCTCCCTGCATGTTACCATGACTGCTGGGTTGCATTTCAATGGGTTGCTTCCCATTTTGCAAAGAACCCCACCAATGCAGAAGAGCCATGGTTGATCAATCATGGTGATTTCAACAGGGTTTTCATTGGGGGTGACAGTGCAGGTGGTAATATAGTGCATAACATTGCCATGCGTGCTGGCACTGAGGCTTTACCTGGTGATGTTAAAATATTAGGAGCTATTTATTCACACCCTTACTTCTACAGCTCATACCCAATTGGATCAGAACCTGTTCCAAGGCCTAAGGAGGATATTTGCTATTTGGTTTGGAATTTAGTGTATCCATCTGCGCCTAATGGGATTGATAACCCCATGGTCAATCCTTTGGGTCCAGGGGCACCAAGCTTGGCTGGACTTGGGTGTTCCAAGATTATTGTGTGTGTTGCTGGAAAGGATAACATGAGGGATAGAGGGGTTTGGTACTATGAACTTGTAAAGAAGAGTGGGTGGCAAGGGAAGCTGGAACTGTTTGAAGAGAATGATGAGGATCATGTTTATCATATCTTCCATACAGAATCTGAGAATGGCAAGAAGTTGATCAGACGCTTGGCTTTGTTTCTCCAAGAGTAG 990 0.4525 MASTIPTSSTDTKEVVAEIPSYIRVFKDGTVERPRQTPTVPPSLDDPRTGISSKDIIISHDPTVSARLYLPKLHQTEKVSILVYFHGGGFFFESAFSQLYHDHFNSFVSQTNVIVVSVEYRLAPEYPLPACYHDCWVAFQWVASHFAKNPTNAEEPWLINHGDFNRVFIGGDSAGGNIVHNIAMRAGTEALPGDVKILGAIYSHPYFYSSYPIGSEPVPRPKEDICYLVWNLVYPSAPNGIDNPMVNPLGPGAPSLAGLGCSKIIVCVAGKDNMRDRGVWYYELVKKSGWQGKLELFEENDEDHVYHIFHTESENGKKLIRRLALFLQE* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02952 329 Gene3D alpha/beta hydrolase 5 328 IPR029058 -
Rops6g02952 329 Pfam alpha/beta hydrolase fold 82 307 IPR013094 GO:0016787
Rops6g02952 329 SUPERFAMILY alpha/beta-Hydrolases 9 329 IPR029058 -
Rops6g02952 329 PANTHER ARYLACETAMIDE DEACETYLASE 18 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02952 Rops-Chr6 52351805 52353119 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02952 14 329 Carbohydrate Esterase AT1G19190 41.796 1.42e-81 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02952 - K13258 gmx:100795872 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02952 6 52351805 52353119 Rops6g02952 6 52351805 52353119 ECH
Rops6g02952 6 52351805 52353119 Rops1g02418 1 46836418 46839351 PCT