Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02948 ATGAAATTTGGAATGGCTTCCAGCAACAACAACACCAAAGAAATCGTTGCAGAGATTCCCACATGGATCCGGGTCTTCAGCGATGGCACCGTGGAACGGCCGCGAAATTTTCCGATAGTGCCTCCTTTACTTGACGACCCAAAAACTGGAGTCTCATCCAAAGACGTTATCATCTCACCCAACCCCGCAATCTCTGCACGCATTTACCTTCCAAAGGTCGAGGCTGAGAAAGTTCCAATCTACGTCTATTTTCATGGGGGCGGATTCTTTTTTGAATCTGCTTTCTCAAAACTCTTCCATGACCATTTCATCAACTTGGTCCCTCAAGCAAAGGTTATAGTGGTTTCTGTGGAGTACAGGCTGGCTCCAGAGCACCCTCTCCCTGCTGGTTACGATGACTGTTGGGCTGCTCTCCAATGGGTGGCATCCCATTCTACCAAAAACACCATCAACATAGAGCCATGGTTGATTGATCATGCTGACTTCAACAGGGTTTTCATAGGGGGTGACAGTTCAGGTGGTAATATTGTGCATAACATTGCCATGCGTGTTGGCACTGAGGCATTGCCTGGTAATGTTAAAATCTTAGGTGCTGTTTTAGCCCACCCTTACTTCTATGGCTCCCACCCAATTGGGTCTGAACCTGTTACAGGGCTCGACCAGAACTTCTTCAATTTGGTTTGGAAATTGGTGTACCCATCAGCACCAGGTGGGATTGATAATCCCGTGATCAACCCTTTGGCTTCGGGAGCACCTAACTTGGCTGGACTTGCGTGCTCTTCTATTATTGTGTTTGTTGCTGGCAAGGATGGTTTGAGGGACAGAGGGGTTTCTTATTATGAGGCTGTGAAGAAGAGTGGGTGGCAAGGGAAAATTGAACTCTTTGAAGAGAAAGAGGAGGATCATGTTTATCATTTGCTCGAACCGGAGTCTGAGACTGCCAATAAAATGATCAAACGCATTGCTTCTTTTCTCCTCGAGTATTAG 987 0.4671 MKFGMASSNNNTKEIVAEIPTWIRVFSDGTVERPRNFPIVPPLLDDPKTGVSSKDVIISPNPAISARIYLPKVEAEKVPIYVYFHGGGFFFESAFSKLFHDHFINLVPQAKVIVVSVEYRLAPEHPLPAGYDDCWAALQWVASHSTKNTINIEPWLIDHADFNRVFIGGDSSGGNIVHNIAMRVGTEALPGNVKILGAVLAHPYFYGSHPIGSEPVTGLDQNFFNLVWKLVYPSAPGGIDNPVINPLASGAPNLAGLACSSIIVFVAGKDGLRDRGVSYYEAVKKSGWQGKIELFEEKEEDHVYHLLEPESETANKMIKRIASFLLEY* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02948 328 PANTHER ARYLACETAMIDE DEACETYLASE 19 312 - -
Rops6g02948 328 Pfam alpha/beta hydrolase fold 82 305 IPR013094 GO:0016787
Rops6g02948 328 SUPERFAMILY alpha/beta-Hydrolases 14 325 IPR029058 -
Rops6g02948 328 Gene3D alpha/beta hydrolase 10 326 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02948 Rops-Chr6 52333549 52334535 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02948 14 327 Carbohydrate Esterase AT1G19190 42.812 5.78e-86 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02948 - K13258 gmx:111043202 482.256