Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02947 ATGGCTTCCAGCAACAAGAACAAAGAAATCGTTGCAGAGATTCCCACATGGATCCGGGTCTTCAGCGATGGCATCGTGGAACGGCCGCGAAATTTCCCGATAGTGCCTCCCTTACTTGACGACCCAAAAACTGGAGTCTCATCCAAAGACGTTATCATCTCACACAACCCCGCAATCTCTGCACGCATTTACCTTCCAAAGGTCGAGACTGAGAAAGTTCCCATCTACGTCTATTTTCACGGGGGCGGATTCTTCTTTGAATCTGCTTTCTCAAATCTCTTCCATGACCATTTCATCAACTTGGTCCCTCTAGCAAAGGTCATAGTGGTTTCCGTGGAGTACAGGTTGGCTCCAGAGCACCCTCTCCCTGCTGGTTATGATGATTGCTGGGCTGCTCTCCAATGGGTCACATCCCATTCTACCAAAAACACCATCAACCCAGAGCCATGGTTGATCAATCATGGTGATTTCAACAGAGTTTTCACTGGGGGTGACAGTGCAGGTGGTAATATTGTGCATAACATTGCCATGCGTGCCGGCACTGAGCCATTACCTGGTAATGTTAAAATCTTAGGTGCTGTTTTAGCCCATCCCTATTTCTATGGCTCGCACCCAATTGGGTCTGAACCTATTATAGGGCTCGACCAGAACTTCTTCAATTTGGTTTGGAAATTTGTGTACCCATCGGCACCAGGTGGGATTGATAATCCCGTGATCAACCCTTTGTCTCCGGGGGCACCTAACTTGGCTGGACTTGCGTGCTCTTCTATTATTGTGTTTGTTGCTGGCAAGGATGGTTTGAGGGACAGAGGGGTTTCTTATTATGAGGCTGTGAAGAAGAGTGGGTGGCCAGGGAAAATTGAACTCTTTGAAGAGAAAGAGGAGGATCACGATTATCATTTGCTCATACCGGAGTCTGAAACTGCCAATAAAATGATCAAACGCATCGCTTCTTTCCTCCTCGAGTATTAG 972 0.4733 MASSNKNKEIVAEIPTWIRVFSDGIVERPRNFPIVPPLLDDPKTGVSSKDVIISHNPAISARIYLPKVETEKVPIYVYFHGGGFFFESAFSNLFHDHFINLVPLAKVIVVSVEYRLAPEHPLPAGYDDCWAALQWVTSHSTKNTINPEPWLINHGDFNRVFTGGDSAGGNIVHNIAMRAGTEPLPGNVKILGAVLAHPYFYGSHPIGSEPIIGLDQNFFNLVWKFVYPSAPGGIDNPVINPLSPGAPNLAGLACSSIIVFVAGKDGLRDRGVSYYEAVKKSGWPGKIELFEEKEEDHDYHLLIPESETANKMIKRIASFLLEY* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02947 323 Pfam alpha/beta hydrolase fold 77 300 IPR013094 GO:0016787
Rops6g02947 323 SUPERFAMILY alpha/beta-Hydrolases 9 320 IPR029058 -
Rops6g02947 323 Gene3D alpha/beta hydrolase 30 321 IPR029058 -
Rops6g02947 323 PANTHER ARYLACETAMIDE DEACETYLASE 14 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02947 Rops-Chr6 52327865 52328836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02947 7 322 Carbohydrate Esterase AT1G19190 41.925 4.17e-81 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02947 - K13258 gmx:111043202 476.863