Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02916 ATGAATGGTGCTGCTAGTGTTGAGGTTGAGTACTCTGCGTTTGTGGAAGTTGATCCGACAGGAAGATATGGAAGATATGATGAAATTCTTGGCAAAGGAGCTTCCAAGACCGTCTTCAGAGCATTTGATGAGTATGAAGGAATAGAAGTGGCATGGAATCAAGTAAAGCTTTACGACTTTTTGCAAAAACCTGAAGACCTTGAGAGGTTATACTGTGAAATTCATCTTCTCAAGACATTGAAACACAAGAACATCATGAAGTTCTATACTTCCTGGGTTGATACTGCCAACAGAAACATTAACTTTGTCACTGAGATGTTCACCTCTGGGACTCTGAGACAGTACAGGCTTAAACACAGAAGGGTTAACATCAGAGCTGTTAAGCATTGGTGCAGACAGATTTTGGAAGGGCTTCTCTATCTCCACAGCCATGACCCTCCTGTTATCCATAGAGATCTCAAGTGTGATAACATTTTCATCAATGGCAACCAAGGGGAAGTCAAAATTGGTGATCTTGGCCTTGCTGCAATTCTCCGCAAATCTAATGCTGCTACCTGTGTTGGCACACCTGAGTTCATGGCTCCAGAAGTGTATGAAGAGGATTACAATGAATTGGTTGACATATACTCTTTTGGAATGTGCATCTTGGAGATGGTCACCTTTGAATATCCTTATAGTGAATGCAACCATCCTGCTCAAATTTACAAGAAAGTTGTCTCTGGAAAGAAGCCAGAAGCTCTTTACAAAGTAAAAGATCCCGAGATAAGGCAGTTTGTAGAGAAATGCTTAGCAACTGTGTCCCTCAGACTTTCAGCCAAAGAACTCTTGGAGGACCCTTTTCTCCAAATTGAAGATTATGGATCTGACTTGAAAGCAGTGCACTATCAAAGAGATTGCTATGAAATAATCCCTACAATTAGACAACCTCTGAATGGAATCCATGGCATTAACAACATCTTAATGAATGGATACACTGATCATCTTGGTGGTTATGGACCTGTATCTGAATTGGATTACCATCAAGATGATTTTGAACGGAGTGAAATTGATCTCTTTGATTGTGAAGAGGATGGTAATTTGACTGAAGTTGACCCCACAATCGAAGGTAGGAGAAGAGAAGACGATGGCATCTTTCTGAGAATCAGAATAGCAGATAAGGAAGGTCGAGTTCGAAACATCTACTTCCCATTTGACACAGAGACTGATACTGCATTAAGCGTTGCAAATGAAATGGTAGCTGAGCTTGACATGACTGACCAAGATGTAACAAAATTAGCAAATATGATAGATAATGAAATTGCAACTTTGGTCCCAGGGTGGAAAAAGGGATCCAGAATAGAGGAAATTTCAGAATGTTCAAATCCAAATTTCTGCCTAAATTGTGCTGCAAATAGTTCCTTATTTGATTATGTATCATCAAATAATCCACGTGCCAAGAATCTGCAATTTCTTCATTGTTCTAAAAATGGATGTGCTGCAGTTCATGGCCGATTTGAGGAGATCACATACCAAGTTGAAGGGTCTGGAAATAATGCCACAGAAGGTAATCCAGCTGCATCTAGCCAATCCAATGGCATTCATTATACTGATATCTGGGCTCAGCTAGATGAATCAGAGTTATGTCCTAAAGGGTTGAAAGACATACATTGTGACCAAGTTCATGAGACATCAAACTTACCAACCATCAAGGAGGATGAGACAACTATTAATGTGGATGACCAAAGTGATCTCAATACAAAAAAGCTTCCTTCGAGCCCTGCATCAGATTGTGCTCAATTGGACTATGAAAATGAAATAAGGCAAGAACTAAGATGGCTCAAAGCAAAGTACCAAATGCAGTTAAGAGAGCTTAGAAACCACCGACTAGGAGGTAAACCAAAATATACTTGCATATCTCCTGACATTGAAAAATTAGAGCATGGGAAAAATGGAGTTCTGAGGCTATCAGCTAAATCCCACTCGAAGATGCAAAACAATAAACAGTTATTGAGATCTTTGGCTTCTGGGAAGCATTTTCCTGTTGATGCTGAAAAATTCACTACTTTGGCTGATCAAATGATTCATAATGTTGATGGGACGAGTCGGCCTAACAGTCCGGAGCAAATGGTCACAGCCAAGGATTTCTTTGAAGGAGCCTTGCTTCCACACTCACTTCATAGGGCAACCTCACTTCCTGTTGATGCAGTGGATGTCTAG 2196 0.4035 MNGAASVEVEYSAFVEVDPTGRYGRYDEILGKGASKTVFRAFDEYEGIEVAWNQVKLYDFLQKPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILEGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAATCVGTPEFMAPEVYEEDYNELVDIYSFGMCILEMVTFEYPYSECNHPAQIYKKVVSGKKPEALYKVKDPEIRQFVEKCLATVSLRLSAKELLEDPFLQIEDYGSDLKAVHYQRDCYEIIPTIRQPLNGIHGINNILMNGYTDHLGGYGPVSELDYHQDDFERSEIDLFDCEEDGNLTEVDPTIEGRRREDDGIFLRIRIADKEGRVRNIYFPFDTETDTALSVANEMVAELDMTDQDVTKLANMIDNEIATLVPGWKKGSRIEEISECSNPNFCLNCAANSSLFDYVSSNNPRAKNLQFLHCSKNGCAAVHGRFEEITYQVEGSGNNATEGNPAASSQSNGIHYTDIWAQLDESELCPKGLKDIHCDQVHETSNLPTIKEDETTINVDDQSDLNTKKLPSSPASDCAQLDYENEIRQELRWLKAKYQMQLRELRNHRLGGKPKYTCISPDIEKLEHGKNGVLRLSAKSHSKMQNNKQLLRSLASGKHFPVDAEKFTTLADQMIHNVDGTSRPNSPEQMVTAKDFFEGALLPHSLHRATSLPVDAVDV* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02916 731 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 642 - -
Rops6g02916 731 SUPERFAMILY Protein kinase-like (PK-like) 26 282 IPR011009 -
Rops6g02916 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Rops6g02916 731 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02916 731 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 379 433 IPR024678 GO:0004674|GO:0005524
Rops6g02916 731 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02916 731 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02916 731 MobiDBLite consensus disorder prediction 572 586 - -
Rops6g02916 731 Coils Coil 600 620 - -
Rops6g02916 731 Gene3D - 360 443 - -
Rops6g02916 731 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Rops6g02916 731 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Rops6g02916 731 CDD STKc_WNK 22 281 - -
Rops6g02916 731 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Rops6g02916 731 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Rops6g02916 731 MobiDBLite consensus disorder prediction 564 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02916 Rops-Chr6 51947488 51951235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02916 1 633 MAP Kinase Kinase Kinase AT3G22420 50.373 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Rops6g02916 Pkinase 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02916 K08867 - gmx:100804179 1217.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02916 6 51947488 51951235 Rops6g02916 6 51947488 51951235 ECH