Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02901 ATGGACTTTCCAAGTTGGATACTTCTCATTGTGTTGACATGGGCCATTACTCACATTCTTGGCTCATTATTCCTTGCAAGAACCAGAAAACCAAATTACAAGCTTCCACCAGGACCATCCCCTCGTCCCATTATAGGGAATCTCCTAGAATTAGGGGAAAAGCCCCACGAGACCTTCGCTAATCTTGCTAAGATTCATGGCCCTGTAATGAGTCTAAAGCTAGGACAAATAACCACAGTTGTCATCTCTTCAGCAAACATGGCAAAAGAGGTGCTCCTCACCAATGACCAGCGCAAGAAAGTGCAACAACTGCTCAGTGATATCCATCAAAGCAGCCAAATTGGTGAAGCTGTGGAAATTGGAACAGCAGCATTCAAGACCGCCATTAATCTCTTATCAAACACTGTTTTCTCTGTTGATTTGTTCCAGTCCACAGGTGCAGCAAGGGAGTTCAAGTTCTTGGTGACGGATTTGATTAAACTTGTTGGAACACCAAACGTGGCAGATTTTTTTCCTGTGTTGAAGATGGTTGACTTCCAAGGCATAAAAAGACGACAGTCAAAGAATGTAGGAGAAGTATTGGATGTCTTTGACAGCTTGGTGAACCAACGATTGAAGATGAGGGAAGGCCCCAATTATGAAAGCCACAACGACATGTTAGATGCCTTGCTAGAGATTTCGAAGGAGAACGAGATGATGGACAAACCAACCATTGAACATTTGTTCATGGAACTATTTATAGCTGGAACGGACACTACATCATCTACATTGGAATGGGCAATGAGTGAGGCACTCCACAACCCAGAGGTAATGTCAAGAGCAAGAAAAGAGCTTGAGGAAACGGTTGGCAGAGGTAAGGCTATTGAAGAATCAGATATTGGGAGACTCCCATACCTACAAGCAATAATGAAAGAGACATTCCGGTTGCACCCTCCAGTTCCATTTTTAATCCCTCGAAAAGCTGAGAGGGATGTTGACATAGGTGGCTACACCATCCCAAAGGATGCACAACTGCTGGTGAATGTGTGGACCATTTGCAGAGATCCAACCATATGGGAGAATCCAACTTTGTTCTCACCAGAGAGGTTCTTAGGATCAGATATTGATGTCAAAGGACGAAATTTCGAGCTTACCCCATTTGGTGGTGGGCGAAGAATTTGCCCTGGCTTGCCACTGGCTAATAGGATGTTGGTGTTGATGTTTGGTTCACTGATCAACTCCTTTGATTGGAAGCTTGAAGATGGCATGAAACCACAAGACATGGACATGGATGATAAGTTTGGTTTTTCCTTGGTGAAGGCTCAGCCACTTCGAGTGATTCCCCTCCAAATAACCAATTAA 1341 0.44 MDFPSWILLIVLTWAITHILGSLFLARTRKPNYKLPPGPSPRPIIGNLLELGEKPHETFANLAKIHGPVMSLKLGQITTVVISSANMAKEVLLTNDQRKKVQQLLSDIHQSSQIGEAVEIGTAAFKTAINLLSNTVFSVDLFQSTGAAREFKFLVTDLIKLVGTPNVADFFPVLKMVDFQGIKRRQSKNVGEVLDVFDSLVNQRLKMREGPNYESHNDMLDALLEISKENEMMDKPTIEHLFMELFIAGTDTTSSTLEWAMSEALHNPEVMSRARKELEETVGRGKAIEESDIGRLPYLQAIMKETFRLHPPVPFLIPRKAERDVDIGGYTIPKDAQLLVNVWTICRDPTIWENPTLFSPERFLGSDIDVKGRNFELTPFGGGRRICPGLPLANRMLVLMFGSLINSFDWKLEDGMKPQDMDMDDKFGFSLVKAQPLRVIPLQITN* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02901 446 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 380 389 IPR017972 GO:0005506|GO:0016705
Rops6g02901 446 Pfam Cytochrome P450 100 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02901 446 Pfam Cytochrome P450 36 97 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02901 446 FunFam Cytochrome P450 76C4 95 440 - -
Rops6g02901 446 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02901 446 PRINTS E-class P450 group I signature 300 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02901 446 PRINTS E-class P450 group I signature 377 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02901 446 PRINTS E-class P450 group I signature 341 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02901 446 PRINTS E-class P450 group I signature 387 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02901 446 CDD CYP76-like 63 441 - -
Rops6g02901 446 PRINTS P450 superfamily signature 301 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02901 446 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02901 446 PRINTS P450 superfamily signature 248 265 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02901 446 PRINTS P450 superfamily signature 378 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02901 446 SUPERFAMILY Cytochrome P450 36 441 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02901 446 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 13 97 - -
Rops6g02901 446 Gene3D Cytochrome P450 24 440 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02901 Rops-Chr6 51783753 51791851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02901 1 443 Cytochrome P450 AT2G45550 42.688 2.51e-139 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02901 - K23810 gmx:100805772 626.706