Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02899 ATGCCCAACATGTTCTCTAAGCACCTTCACCTCTGTTTCTTCAAGCTCAAATATCCCACCATTCTATCCCAACCAGACCCACACCACCACCACCACGACCGTCACACCTCATCAACATCACAACCTTCCACTCTCAATTCCACCACTTTCCACTTCAACACCACCTTCACCCACCACAACCACTCCCTCTCTGACGCCACCGACTACTTCTCTTCCTCCTCCGACTCCATGGACCTACCTCCGCCGGATTTTGCCTCCGTCTTCGCCTCACAGCGGTTCTTCTTCTCCTCCCCCGGCAACTCCAATTCGATCATAGAGTCCCCTGACAGTCGCCCCTGCAACTCGTTGATACCAAGAGGGGGTGTAAGGGTGCCCAAGTTCTCCATCAACCCCTACGTGGATTTCTTGCATTCCATGCAGGAAATGATTCATTCCCATCAAATGTTGGAGGTGAGAAATGATTGGGATTATCTTCACGAGCTTCTCTTATGCTACCTTGCTCTCAATCCCACACATACTCACAAGCATATTGTTCGTGCTTTCACACACCTTGTTGTGGACCTTTTGTCATCATCATCGTCATCTTTTTCATCTTCATCTTCATCCTCATCACCACCGTCATCAACCACCCCTTGCCGGATGCATAACAACCAACGTCAGGGTAGTTTCTCAGGGAGGTTGGTGTAA 687 0.4978 MPNMFSKHLHLCFFKLKYPTILSQPDPHHHHHDRHTSSTSQPSTLNSTTFHFNTTFTHHNHSLSDATDYFSSSSDSMDLPPPDFASVFASQRFFFSSPGNSNSIIESPDSRPCNSLIPRGGVRVPKFSINPYVDFLHSMQEMIHSHQMLEVRNDWDYLHELLLCYLALNPTHTHKHIVRAFTHLVVDLLSSSSSSFSSSSSSSSPPSSTTPCRMHNNQRQGSFSGRLV* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02899 228 Pfam Transcriptional repressor, ovate 128 188 IPR006458 -
Rops6g02899 228 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 41 191 IPR038933 GO:0045892
Rops6g02899 228 MobiDBLite consensus disorder prediction 25 44 - -
Rops6g02899 228 NCBIfam uncharacterized plant-specific domain TIGR01568 125 189 IPR006458 -
Rops6g02899 228 MobiDBLite consensus disorder prediction 194 228 - -
Rops6g02899 228 ProSiteProfiles OVATE domain profile. 124 187 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02899 Rops-Chr6 51740238 51740924 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Rops6g02899 Ovate 3.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02899 - - mtr:25485200 225.713