Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02897 ATGGAAGACGAAAGAAACAGTGACAATCACCAAGATAACAATGCTGGCGCGGACAACGATTTCCGGAATCTTACGCCGGTAGGGCCTGAACAATACGGTGAAGGCTTGCCTTATGCGCCGGAAAATTGGCCCAATCCCGGCGACGTTTGGGGCTGGAGAACCGGTAAGAGAGTTACTACTACCGGCCACTTTCTGGATCGGTACCTGTATCTTCCAACTCGTCTTTATGCCGCCCGTAAATCAGGTTCAAGTCGCCGACGGAAAGGTTTTGCTAGCAAGCTTTCCGTTGAACGTTACATCATGGAATCTTTCCCCCACGCTAATCTCGATGATTTCTTCGCGTCATTCAGGTGGAAAATACCTTCTATACAGCCTGGCAATACACAGCCTATAGCTGCTGTACCTCTTCAACTGTTTGCACCAGCGAAACAGTCAGAATCTGATTTACTCTCTGACACTGTTGGATGTAAAGCTGGGAATCAGATGTGTAGCAGCCTGAATTTGAAAGATGAAGAAGAAAAAGATTCACCAGCCATGTCTTGTGAAATCTGCTGTGCTGAACCTGGTTTTTGCCGCGATTGTTGCTGCATTCTTTGTTGCAAAATGGTTGATTCAGCTTATGGTGGCTACAGTTATATCAAGTGCCAAGTAAAAATTGGCGAAAAAAATTGTGGGCATGTTGCTCATTTGGAATGTGCTCTTCGATCTCACATGGCTGGCACAGTTGGAGGAAGTATTGGATTAGATGCTGAGTACTATTGTCGACGCTGTGATGGGAGGACTGATCTGATTTCTCATGTTAATAAGCTTCAACAGACATGTGAAGCTATTAATTTGGAGGATGACATTAAGAAATTTTTTTTAAATCTTGGTATTTGTCTATTGCGTGGTTCACAGAAAGCCATTGCAAAGGAGCTTATAAGTCATATTGAATTAGTCATCTCAAAGCTTAAATGCGGGACCAGTGCTGAAGATATCTTGAATACAGATGAGAATCTTACAGCTCCTTCTGCTGGTTTCTCCGATGATAGTGATGCTGCGATGGATGTTACAGTCAATGAAAGCCCTTTTGATGTTAGAATAGGGACAGAATCTTCTGGTTATTTGTCCGATTCATCAAAACTTGAAGTTGAGGTTGATGAGATTCTCCATAATCTTAGAAAGTCACAGGAGTATGAGTATAGCTTGGCAGAAGAAAAACTCCATGCACATAAGAATTATTTACAAAATTTGTATCAACAACTGGAATTAGAGAAATCTGAATTAGCAAGTCAACCCCACTCATCTCATTCCGATGGCTTGTTTCATGTTGTTAGAGAAAGAAGGGAAAAGATAAGGCAGGAATTCATGAAATTTGAACTCATGAAAAAGGTAACTCATGGTTTTGGCAGCACATCCAAAGATATTTTAGAGGAACACTTTGGCTTACAGATTGCAGATTAA 1443 0.4172 MEDERNSDNHQDNNAGADNDFRNLTPVGPEQYGEGLPYAPENWPNPGDVWGWRTGKRVTTTGHFLDRYLYLPTRLYAARKSGSSRRRKGFASKLSVERYIMESFPHANLDDFFASFRWKIPSIQPGNTQPIAAVPLQLFAPAKQSESDLLSDTVGCKAGNQMCSSLNLKDEEEKDSPAMSCEICCAEPGFCRDCCCILCCKMVDSAYGGYSYIKCQVKIGEKNCGHVAHLECALRSHMAGTVGGSIGLDAEYYCRRCDGRTDLISHVNKLQQTCEAINLEDDIKKFFLNLGICLLRGSQKAIAKELISHIELVISKLKCGTSAEDILNTDENLTAPSAGFSDDSDAAMDVTVNESPFDVRIGTESSGYLSDSSKLEVEVDEILHNLRKSQEYEYSLAEEKLHAHKNYLQNLYQQLELEKSELASQPHSSHSDGLFHVVRERREKIRQEFMKFELMKKVTHGFGSTSKDILEEHFGLQIAD* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02897 480 Pfam PHD - plant homeodomain finger protein 159 285 IPR032881 -
Rops6g02897 480 PANTHER ADAPTER PROTEIN, PUTATIVE-RELATED 5 477 - -
Rops6g02897 480 Coils Coil 405 425 - -
Rops6g02897 480 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02897 Rops-Chr6 51716542 51719747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02897 190 318 PHD Gene Family AT5G57380 30.233 1.60e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02897 - - gmx:100811562 533.102