Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02877 ATGCATCCAAGCCAAGAAGTACCCATAATGGAGGGAGCTGCTATTTATTCCAGATCAGATGCCAAAGAAGAGTGTGTTGACTTAAGCCAAATCTCTCTTCGACCCATTGATCTTTCTGATCTTGATGATCTCATGTTGTGGACCACTGATGAAAAAATGGCCAAGTATTGCACTTGGGAACCTTATACAAGCAAAGAGGATGGCATTAACTTCATCCAAAATATAGCAAGCAAGGCTCTATGGTTCAGAGCAATTTGTCTTCATAATCGTGAAATTGGGTGTATTGATTTGTTCCCATGTTCTGGCCAGGCTAAATGCAGGGACAAAACTGCTGAACTTGGCTATGCTTTGAGCTCCATTTACTGGGGTAAAGGGATTGCCACAAAGGTTTTGAAACAAGTGGTTGAAGCTGCTTTCAGTGAATTTCCATACTTGGAGAGGCTTGAAGCTTTGGTTGATGTGGAAAATGTGGCTTCTCAGAGGGTGCTGGAGAAGGCTGGTTTTCAAAAGGAGGGAGTTCTCAGAAAATATCTGTTCATTAAAGGAAAAAGTAGAGATATGGTCATGTTCAGTATTCTATCAAATGATCCGCAAATTTGA 600 0.4117 MHPSQEVPIMEGAAIYSRSDAKEECVDLSQISLRPIDLSDLDDLMLWTTDEKMAKYCTWEPYTSKEDGINFIQNIASKALWFRAICLHNREIGCIDLFPCSGQAKCRDKTAELGYALSSIYWGKGIATKVLKQVVEAAFSEFPYLERLEALVDVENVASQRVLEKAGFQKEGVLRKYLFIKGKSRDMVMFSILSNDPQI* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02877 199 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 28 196 - -
Rops6g02877 199 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 31 186 IPR000182 GO:0016747
Rops6g02877 199 Pfam Acetyltransferase (GNAT) domain 32 169 IPR000182 GO:0016747
Rops6g02877 199 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 31 193 IPR016181 -
Rops6g02877 199 Gene3D - 18 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02877 Rops-Chr6 51350047 51350883 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops6g02877 Acetyltransf_3 1e-24 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02877 - - gmx:111043201 307.76