Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02867 ATGAACGGAGGCGGCACGGTCACCTTCCGATCCATCTTGGACAAACCCCTCAACCAGCTTACCGAAGATGACATTTCACAGCTCACCCGCGAAGACTGTCGCAGATTCCTCAAAGCAAAAGGGATGCGCAGGCCTTCGTGGAACAAATCGCAGGCGATCCAGCAGGTCATTTGCCTCAAAGCCCTTCTCGAATCCCCCGACGACGATGATTCCCCCGTCACTCACTACCACCACCCTCCTCCTCCTCCTCCTCCTCAAGGTACTTTGAGTGAAGCTCCGACGAATGATCCGGCTGCTGATGACGCCGGTTTTCATGCTCCGGAGGAGCTTCAGAAATCTCCGTCGTCTGCGGAAAAACCTACGGAAACAAATGATACCAACGTTGTTAGCCCCAGAGGGTGTGCAACTAGTGGGTCATTTAGGCAAATGACAATTTTCTACAGTGGTAAGGTGAATGTCTATGATGGAGTCTCACCTGATAAGGCACAGGCAATCATGCAGCTTGCTGCAAGTCCAGTCCAATTTCTTCAGGATGATCCTTTAAATAAAAATGCAACAGTTTGGGCTTCTCCCTGCCACTTACCGACAGATAAGATGGTGGAATATCCCCTGCAATACAGGGAGAAAGGGAGCATAGCTCGTGATGCTGATGTAGAGGGTCAGGCAAGCAGAAAAGTGTCATTGCAGCGATATCGTGAAAAGCGAAAAGACAGGGGAAGATTGAAGGGCAAGAAATTGACTGGCATAACTTCACATAACTTCGAGATGTATTTGAACCTTCCAGTGAAGGTCCATGGCTCAAATGGGAATTCAAGCCGTAGTAGCACTAGCTCTCCACCACAGCCTAGACTGCCTCTAGTTTCCAGTGGCACAGCTGACAACCAGCTAAAAGTTGCCCTTCCCATTGATCTCAATGACAAAGGTGTTCAAGAATGCTAA 939 0.4931 MNGGGTVTFRSILDKPLNQLTEDDISQLTREDCRRFLKAKGMRRPSWNKSQAIQQVICLKALLESPDDDDSPVTHYHHPPPPPPPQGTLSEAPTNDPAADDAGFHAPEELQKSPSSAEKPTETNDTNVVSPRGCATSGSFRQMTIFYSGKVNVYDGVSPDKAQAIMQLAASPVQFLQDDPLNKNATVWASPCHLPTDKMVEYPLQYREKGSIARDADVEGQASRKVSLQRYREKRKDRGRLKGKKLTGITSHNFEMYLNLPVKVHGSNGNSSRSSTSSPPQPRLPLVSSGTADNQLKVALPIDLNDKGVQEC* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02867 312 MobiDBLite consensus disorder prediction 114 134 - -
Rops6g02867 312 ProSiteProfiles Tify domain profile. 136 171 IPR010399 -
Rops6g02867 312 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 10 255 IPR040390 -
Rops6g02867 312 Pfam tify domain 141 170 IPR010399 -
Rops6g02867 312 MobiDBLite consensus disorder prediction 265 292 - -
Rops6g02867 312 MobiDBLite consensus disorder prediction 67 134 - -
Rops6g02867 312 MobiDBLite consensus disorder prediction 215 243 - -
Rops6g02867 312 SMART tify_2 136 171 IPR010399 -
Rops6g02867 312 Pfam Jas motif 221 238 IPR018467 -
Rops6g02867 312 MobiDBLite consensus disorder prediction 215 234 - -
Rops6g02867 312 MobiDBLite consensus disorder prediction 76 90 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02867 5 259 Tify Gene Family AT4G14720 50.368 2.31e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Rops6g02867 tify 2.1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02867 - - gmx:100808970 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02867 6 51221187 51227153 Rops6g02867 6 51221187 51227153 ECH