Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02849 ATGGAGGAAGAGAATCAGTGCTTCGAGTGCCTCCAACTTCGAATCAACTCCGATTTCTCTGACCAACTCTTCTTCGATTATGCCATCTCCTCTTCTCCTTTTCCTTTCGGATCCTCCGCTATCGTCCATATATCTAGTACAGCAGGTGCTGAAACTTCAGGCGCTCAATTCATATTGCAGTACTTGCCCAGCCACGACAAGAATTGTTTTACCAATTATGTAAATGAATATATTTTGGATAGTAGTGAAAGCACTAGGAATGACAATGATCCTGATGTTGGGGACAGTCAACATAATAACGTGGTTAATGGTGGAATTACTTCATCAGATGATTCTGAAACTGGAAAAGCGTCTTCCAGAAGCACAACATGTAATCATTCTGGAAGGTTTTCTTGCTCGAGGACAATCACTTCACTGGCTCCCATTGCTCGTGTTGGGATGTCTTCCGATTCTATATTGCAAGAGGTTGCCACTGATTTCTTTTCTGGGTTGATTGAAGATCATGTTTTAGATTCACTTGATTTGTTCATTGAAGGGAAAGCGTCTAGACGGGACAGTATAAATTTCCTTAGTTTACTCGGGTTGCCATCATTTGAGGAAGATACTTTTCTGGGCTCTTTGAGGCATCCAAACATAGCTCCTGCACTTGCAATTTTGAAAACATCTGATCACATTAACATAGTGCTTCCAAAGACTCCATACAATTTGGAAAGCATTCTTCATTTTAACCCCAATGCCTTAAAGTCTGATTGGAATAAAAGGTTTCTTATATATCAGCTACTCTCTGCCTTATGCTACTTACATGGTTTAGGGGTTTCCCATGGTAATATATGCCCATCCAATATCATGTTGACTGACTCGTTATGGTCTTGGCTGAGATTGTGGGATGAACCTGTATTGGAATCCAATTTAACTTTGCACAAGGGTGAAAGTGTTAATTCTAAACCTGCAAAAATTGGTTGCTGTAATGGTGGCTGTCATTCTAATAGCCTTTATGCCGATCTAAAGCTTTCTCCATCAATAGATTGGCATTCTAGCTTTAATCAGTGGTGGAGAGGAGAACTAAGTAATTTTGAGTATTTACTCATCTTAAACAGATTAGCAGGAAGAAGGTGGGGTGACCATACATTTCATCCAGTGATGCCTTGGGTAATTGATTTTAGCTCAAAACCTGATGATAATTGTGATGCAGGGTGGCGAGACTTAAGCAAGAGCAAATGGCGCTTGGCAAAAGGTGATGAACAGTTAGATTTCACTTATTCAACGTCTGAAATCCCTCATCATGTATCAGATGAATGTCTGTCTGAATTGGCTGTCTGCAGTTATAAAGCAAGAAGGCTGCCTTTGAGTGTTCTCCGAATGGCTGTTCGTTCAGTGTATGAACCTAATGAATATCCTTCCACAATGCAAAGGCTCTATCAATGGACCCCCGATGAATGCATTCCAGAGTTTTACTGTGATGCCCAAATTTTTAGGTCAATACATGATGGTATGGCTGATTTGGCTGTACCTTCTTGGGCAGAGACTCCCGAGGATTTCATTAAATTGCATCGTGATGCATTAGAAAGTGATAGGGTGTCATTTCAACTCCATCATTGGATAGATATAACCTTTGGGTACAAAATGTCTGGCCAAGCAGCAGTTGTTGCTAAGAATGTTATGCTTCCTCTATCAGAACCCACAATGCCAAGATCAACAGGACGTCGTCAGCTCTTTACACGACCACACCCCATCCGTCATGCCACTCCTAGAATAACACGTCATGGTTCCAATAAATATGCCAAGGTTTGGAGCCAATCAAATGAAATGCAACGAGAGACATCTCTTCTATCTGAAACTGCTTATCTACAAGAACTAGAACAAGCATCTGCATTTTCCGAACATGCTAGGCATTTGAATGCTTGTTACCATTATCCATTAAATCAAATGAAAAGGAAGAGCATCTCATCTTTGGGAGATCCAACAACGGACACAGTTAGTAAAAATACAACCAAACTATCTTTGATTGACAGAAATTACTGGGTGCCATATAAAATGAATCCAATTTCTTTTCTTCAACATATGAAAGAGGAAGATGAAAGCTCCTCAGGATATCCAGACTTGCTGCTTTGGAGGCAGAAATTGTCTTCTTCAAGACTTGCCTCTGAAGATGTTGCAAGGGACATATTTTCTGTTGGTTGTCTCTTAGCAGAACTTCATCTTTGCAGGCCACTCTTTGATTCAATCTCATTGGCAGTATACTTGGAGGATGGAACCTTACCAGGACTTCTGCAGGAACTACCTCCTCATGTTAGATTACTTGTTGAAGCATGCATCCAAAAGGACTGGATGAGGAGACCATCAGCCAAAATTCTTCTAGAGTCTCCTTATTTTCCAAAGACAGTCAAGTCCTCCTACTTGTTTCTTGCTCCACTTCAGCTTGTAGCTAAAGATGAAACACGTCTTCGTTATGCTGCAAATCTTGCAAAGCAGGGAGCTCTTAGGGAAATGGGCGCATTTGCCACTGAAATGTGCGCCACTTATTGCTTACCACTTATATTGAACGCTGTGAATGATACTGAAGCTGAATGGGCATATATACTACTGAAGGAATTGATGAAATGCTTAACAGCACAAGCAGTGAAAACATTAATATTGCCAACCATACAGAAAATTTTACAGACCACAGGTTTTTTACATTTAAAGGTTTCCCTTTTACAAGATTCATTTGTACGTGAAATATGGAATTGTGTTGGTAAACAAGCATACCTGGAAACCATCCACCCATTGGTCTTGTCAAACTTGTATATTTCTCCAGATAAAAGCTCAGCTGCCTCTGCGTCAGTGCTTCTAATTGGTTCTAGTGAGGAGATTGGTGTACCTATTACCATTCATCAGACTATCTTGCCTCTTATTCACTGCTTTGGGAAAGGACTGTGTGCAGATGGCATTGATGTGCTGGTCAGAATTGGTGGTATTTTTGGGGAATCCTTTATTGTTAAACAGATGCTACCATTACTGAAAAATGTCGCTCGTTCCTTCATTGATATGTCATGCATGAATAAGCCTGATCCAGTCCAGAGTTGGAGTGCTTTGGCACTTATTGATTGTTTGATGACTTTAGATGGTCTTGTAGCTTTCTTGACAGAAGATGTCATTGTAAAGGAGCTGCTTGAAGACCTAAGTTGCTTACACATCGGGGTTCTTATGCAGAAACACATGGAAATTGCTGTGCTTCAGGTTGCTGCTACTAGTCTCTTTGGAATTTGTCAGCGGGTTGGGGCAGATTTGACGGCATTGCATATTCTTCCAAAACTTAAAGAACTATTTGATGAGCTTGCTTTCTCCCAGGAAATTTCTAAAGGTTCGACTACTGTAGGCAGAAACTTGAAGGTTATCAAATTAAAAATTGGAGGCGACTTGCAAATTGAAAGTCGTGCAGATCTAGTGTTGCTTCTCTATCCTTCCTTTGCATCTCTTCTTGGGATAGAGAAACTCCGTCAATGTTGTGCTACATGGTTGCTTCTTGAACAATTTCTTCTACGCTGTCATAATTGGAAGTGGGAATATGCAGGAGAATCATCAAAAAATGGCTCAGAAAATGTTATTGCCAGAAGACCTGCGATTGGCCAGGGGTTCACATCTGAATACAATCCAGCAAAGCTGTTGCTGAATGGGGTTGGATGGTCAATTCCACAATCCCAAGGAAGCAGAAGTGCCAAAAATTTGATTCCTCAGAGACGATCATTTAAAGTTCAACAAAGCCCAGCAGTATTGCACGAAGGAATGTACCAAATGAACCATGAACCCTGGTTTTGGTTCCCTAGTCCAGCCACCATCTGGGATGGGCCTGAATTTCTTGGGCGGGTGGGGGTTCAGAAAGATGACCTTCCGTGGAAGATCAGAGCATCTGTAATTTACTCTATTCGTGCACATCATGGAGCAGTGAGGTCTCTGGCTGTTCATCAGGATGAATGTACTGTTTTTACTGCAGGAATTGGCCAAGGATATAAAGGAACTGTTCAGAAGTGGGAATTGAGCCGAACTAACTGTCTGTCTGGCTATCATGGCCATGAAGAGGTTGTGAACGATATTTGCATCTTATCATCCAGTGGAAGAGTGGCGTCTTGTGATGGAACAATTCATATTTGGAATAGTCAAACAGGGAAGCAAATATCAGTATTTGCCGAGTCCCAAGCAGAATCTGGCCATCCTACAAACCATTCACCCTCTGTGGCAAAAATTAACAGTGACCAGGCAAATGTCCTTAATTTGAATACACTATCAAATGGAATATTGTCTAGTGCTTTCGATTCAAGCCTTTATACTTGTATGCATCTATTAGACTCTGCTGAGACTCTTGTAGTTGGCACTGGAAATGGTTCTCTCAGGTTCATTGATGTTGCTCGAGGTCAAAAGCTGCATATCTGGAGGGGGGAGTCTAATGAATCTAGTTTTCCTTCACTTATTTCTGCTATTTGTTCCTCTGGTTCTGACAAAATGCAAGCAGGTGGAATTTCCACTCCGCCATCTTTAATTGCAACTGGACTAAGTTCTGGTCACTGTAAATTATTTGATGCAAAGAGTGGAAATGTCATTGCCTCTTGGCGAGCTCATGATGGATATGTAACAAAGTTGGCAGCACCTGACGAGCATCTGCTCATTTCCAGCTCTCTGGATAGAACTTTACGAGTGTGGGACTTGAGAATGAATTTGCCATCGCAGCCCATTATTTTCAGAGGTCATTCAGATGGCATATCCAGTTTCTCCATTTGGGGCCAAGATGTTATTTCAATTTCCCGGAATAGGATTGGGCTTCTTTCCTTGTCTAAATCTGCCAATGAAACAGATGGGCAACATTACATTATCCCCCAGAAACTCTACGTGTCTGATAATGGAATGAGAAGCTTGTCAGCATTATCAAGTATTAGCATACTTCCATTCTCTCGATTGTTTCTCATTGGAACAGAAGATGGTTATTTGAGAATCTGTTGTTAA 4977 0.4117 MEEENQCFECLQLRINSDFSDQLFFDYAISSSPFPFGSSAIVHISSTAGAETSGAQFILQYLPSHDKNCFTNYVNEYILDSSESTRNDNDPDVGDSQHNNVVNGGITSSDDSETGKASSRSTTCNHSGRFSCSRTITSLAPIARVGMSSDSILQEVATDFFSGLIEDHVLDSLDLFIEGKASRRDSINFLSLLGLPSFEEDTFLGSLRHPNIAPALAILKTSDHINIVLPKTPYNLESILHFNPNALKSDWNKRFLIYQLLSALCYLHGLGVSHGNICPSNIMLTDSLWSWLRLWDEPVLESNLTLHKGESVNSKPAKIGCCNGGCHSNSLYADLKLSPSIDWHSSFNQWWRGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSSKPDDNCDAGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDAQIFRSIHDGMADLAVPSWAETPEDFIKLHRDALESDRVSFQLHHWIDITFGYKMSGQAAVVAKNVMLPLSEPTMPRSTGRRQLFTRPHPIRHATPRITRHGSNKYAKVWSQSNEMQRETSLLSETAYLQELEQASAFSEHARHLNACYHYPLNQMKRKSISSLGDPTTDTVSKNTTKLSLIDRNYWVPYKMNPISFLQHMKEEDESSSGYPDLLLWRQKLSSSRLASEDVARDIFSVGCLLAELHLCRPLFDSISLAVYLEDGTLPGLLQELPPHVRLLVEACIQKDWMRRPSAKILLESPYFPKTVKSSYLFLAPLQLVAKDETRLRYAANLAKQGALREMGAFATEMCATYCLPLILNAVNDTEAEWAYILLKELMKCLTAQAVKTLILPTIQKILQTTGFLHLKVSLLQDSFVREIWNCVGKQAYLETIHPLVLSNLYISPDKSSAASASVLLIGSSEEIGVPITIHQTILPLIHCFGKGLCADGIDVLVRIGGIFGESFIVKQMLPLLKNVARSFIDMSCMNKPDPVQSWSALALIDCLMTLDGLVAFLTEDVIVKELLEDLSCLHIGVLMQKHMEIAVLQVAATSLFGICQRVGADLTALHILPKLKELFDELAFSQEISKGSTTVGRNLKVIKLKIGGDLQIESRADLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRCHNWKWEYAGESSKNGSENVIARRPAIGQGFTSEYNPAKLLLNGVGWSIPQSQGSRSAKNLIPQRRSFKVQQSPAVLHEGMYQMNHEPWFWFPSPATIWDGPEFLGRVGVQKDDLPWKIRASVIYSIRAHHGAVRSLAVHQDECTVFTAGIGQGYKGTVQKWELSRTNCLSGYHGHEEVVNDICILSSSGRVASCDGTIHIWNSQTGKQISVFAESQAESGHPTNHSPSVAKINSDQANVLNLNTLSNGILSSAFDSSLYTCMHLLDSAETLVVGTGNGSLRFIDVARGQKLHIWRGESNESSFPSLISAICSSGSDKMQAGGISTPPSLIATGLSSGHCKLFDAKSGNVIASWRAHDGYVTKLAAPDEHLLISSSLDRTLRVWDLRMNLPSQPIIFRGHSDGISSFSIWGQDVISISRNRIGLLSLSKSANETDGQHYIIPQKLYVSDNGMRSLSALSSISILPFSRLFLIGTEDGYLRICC* 1659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02849 1658 ProSiteProfiles Trp-Asp (WD) repeats profile. 1529 1562 IPR001680 GO:0005515
Rops6g02849 1658 MobiDBLite consensus disorder prediction 94 128 - -
Rops6g02849 1658 Gene3D BEACH domain 340 579 IPR036372 -
Rops6g02849 1658 SUPERFAMILY Protein kinase-like (PK-like) 717 809 IPR011009 -
Rops6g02849 1658 PANTHER GH12955P 1 1658 - -
Rops6g02849 1658 ProSiteProfiles BEACH domain profile. 335 605 IPR000409 -
Rops6g02849 1658 Pfam Protein kinase domain 199 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02849 1658 ProSitePatterns Trp-Asp (WD) repeats signature. 1547 1561 IPR019775 -
Rops6g02849 1658 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1529 1562 - -
Rops6g02849 1658 SUPERFAMILY Protein kinase-like (PK-like) 201 292 IPR011009 -
Rops6g02849 1658 SMART Beach_2 347 579 IPR000409 -
Rops6g02849 1658 Gene3D Transferase(Phosphotransferase) domain 1 704 799 - -
Rops6g02849 1658 MobiDBLite consensus disorder prediction 82 128 - -
Rops6g02849 1658 SUPERFAMILY WD40 repeat-like 1298 1656 IPR036322 GO:0005515
Rops6g02849 1658 Pfam Beige/BEACH domain 349 560 IPR000409 -
Rops6g02849 1658 Pfam WD domain, G-beta repeat 1524 1560 IPR001680 GO:0005515
Rops6g02849 1658 Pfam WD domain, G-beta repeat 1343 1378 IPR001680 GO:0005515
Rops6g02849 1658 CDD Beach 348 579 IPR000409 -
Rops6g02849 1658 SUPERFAMILY BEACH domain 336 579 IPR036372 -
Rops6g02849 1658 SMART WD40_4 1341 1378 IPR001680 GO:0005515
Rops6g02849 1658 SMART WD40_4 1295 1338 IPR001680 GO:0005515
Rops6g02849 1658 SMART WD40_4 1623 1658 IPR001680 GO:0005515
Rops6g02849 1658 SMART WD40_4 1423 1460 IPR001680 GO:0005515
Rops6g02849 1658 SMART WD40_4 1522 1560 IPR001680 GO:0005515
Rops6g02849 1658 SMART WD40_4 1463 1519 IPR001680 GO:0005515
Rops6g02849 1658 Gene3D - 1500 1658 IPR015943 GO:0005515
Rops6g02849 1658 Gene3D - 1291 1499 IPR015943 GO:0005515
Rops6g02849 1658 Gene3D Transferase(Phosphotransferase) domain 1 196 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02849 Rops-Chr6 51067115 51076728 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Rops6g02849 Beach 1.4e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02849 K17601 - gmx:100810047 2961.01