Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02841 ATGGCCTCTAAAACCGAAAGCCAGAATTCAATCTCTACTACTCCATCATCGCCAAAGAACATATACAAAGATCCAGATGATGGGCGGCAAAGGTTTTTGCTTGAATTGGAATTTGTCCAATGCCTTGCTAATCCTACCTATATTCACTATTTGGCTCAGAACCGATATTTTGAGGATGAAGCATTCATTGGATACTTAAAGTATCTTCAATATTGGCAACGCCCTGAATATAGTAAATTTATTATGTATCCTCACTGCCTCTATTTTCTTGAGCTTCTTCAGAATGCGAATTTTCGCAATGCAATGGCACATCCTGGCAATAAGGAACTGGCACATAGACAACAATTCTACTTCTGGAAGAACTATAGGAACAATCGGTTAAAACACATTTTACCCAGACCACTTCCTGAACCTAGTGCCATCCCTGCAGTTTCTGCTCCGGCTTCAACGCCTGCACTACCACCAGCACCTGCTACAAATGTTGCTGTGACAGCATCATCTACTCAAGCCCCTTCTCCAATGCCATATGGTATACCCCCTGGCTCTGCTCTTGCAAAAAGTGACATGAGGAATCCTACAGTTGATAGAAGGAAGAGAAAGTGA 603 0.4229 MASKTESQNSISTTPSSPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYSKFIMYPHCLYFLELLQNANFRNAMAHPGNKELAHRQQFYFWKNYRNNRLKHILPRPLPEPSAIPAVSAPASTPALPPAPATNVAVTASSTQAPSPMPYGIPPGSALAKSDMRNPTVDRRKRK* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02841 200 MobiDBLite consensus disorder prediction 1 20 - -
Rops6g02841 200 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 17 119 IPR038089 -
Rops6g02841 200 MobiDBLite consensus disorder prediction 155 200 - -
Rops6g02841 200 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 1 200 IPR008831 GO:0003712|GO:0006355|GO:0016592
Rops6g02841 200 MobiDBLite consensus disorder prediction 1 23 - -
Rops6g02841 200 Pfam SOH1 30 122 IPR008831 GO:0003712|GO:0006355|GO:0016592
Rops6g02841 200 FunFam Mediator of RNA polymerase II transcription subunit 31 18 119 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Rops6g02841 Med31 1.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02841 K15153 - gmx:100527879 328.946