Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02839 ATGGAAGATGATGGGTTGGTGCTGTTGTTTTATGGTAGTCATAGGAAGTTGAGGTTTCTGTTCTTTCCTATGGCAATGGTGGTGCTTATGCTGTTACTTCTCTCTCCATTTGCTTCGCCACTCAGTGAAGAAGGACAAGCATTAATGGCCATCAAGGCTTCCTTCAGCAATATAGCAGACGTGCTCCTTGATTGGGATGATGTACACGATGACGATTTCTGCTCTTGGCGTGGGGTCTTCTGTGATAATGTCAGCCTTACAGTGATATCTCTGAATCTGTCAAGCTTGAACCTGGGTGGGGAGATATCACCAGCCATTGGTGATTTAGGAAACTTGCAATCCATTGACTTGCAAGGGAATAAACTAACTGGTCAAATCCCAGATGAAATTGGAAACTGTGCTGAGCTTATCCATCTGGATTTGTCTGATAATCAGCTATATGGTGACATACCTTTCTCCATTTCAAAGCTAAAGCAACTTGAGTTTTTGAGTTTAAAGAGTAATCAGTTGACTGGTCCTATACCTTCAACTTTAACACAAATTCCAAACCTGAAGACTCTTGATCTTGCTAGAAATAAGCTCACTGGGGATATTCCAAGACTACTCTATTGGAATGAAGTCTTGCAGTACCTAGGGTTACGAGGGAACATGTTGAGTGGAACTCTGTCCCCTGATATCTGTCAATTAACTGGTTTGTGGTATTTTGATGTGAGAGGCAATAATTTGACTAGTACTATACCTGACAGCATTGGAAACTGTACAAGTTTTGAAATATTGGACATTTCATATAATCAGATTAGTGGGGAGATTCCCTACAATATTGGATTTCTGCAAGTGGCTACTTTGTCACTTCAAGGAAATAAGCTTACTGGGAAGATTCCAGAAGTGATTGGTTTGATGCAAGCCCTTGCAATTTTGGATTTGAGTGAGAATGAGCTAGTTGGATCAATTCCTCCAATACTTGGCAATCTGTCTTTTACTGGCAAGCTGTACCTTCATGGAAACAAGCTTACTGGTCCAATACCTCCTGAACTTGGCAATATGTCTAAATTGAGCTACCTGCAATTGAATGACAACCAACTTGTGGGTAAAATTCCTGATGAAATTGGGAAGCTTGAACATTTGTTCGAATTGAATCTTGCCAATAATCACCTTGATGGATCTATTCCACATAACATAAGCTCCTGCACTGCCTTAAATCAGTTTAATGTGCATGGTAATAAATTAAGCGGTTCTATTCCACTGAGCTTTCGCAGCCTTGAGAGTCTGACTGACTTAAATCTTTCTGCAAACAATTTCAAGGGGATTATACCAGTTGAGTTGGGCCATATCATAAATCTTGATACTCTGGATCTATCAAACAATAATTTTTCAGGACATGTCCCGGCATCTGTTGGTTATCTAGAGCATCTTTTGACCCTGAATTTGAGTCATAATAGCCTTGATGGTGCCTTGCCTGCTGACTTTGGGAATCTCAGAAGCATACAGATTATTGATATGTCATTTAACAACTTGTCTGGTAGCATTCCTCCGGAGATTGGTCAGCTGCAAAACCTCGTTTCTCTGATTTTAAACAATAATGACCTGCGTGGGAAGATTCCTGATCAGCTGACTAATTGTTTCAGTCTTTCCTCTCTAAACTTCTCTTATAATAACTTTTCTGGAGTTGTTCCATCTATGAAGAACTTCTCACGGTTTTCAGCTGACAGTTTCATTGGAAATCCTATGTTATGTGGAAATTGGGTAGGATCAATCTGTCGTCCTTACCTACCGAAATCAAGAGAGATTATTTCGAGAGTTGCTGTTGTATGTCTTACTCTTGGTATCATCATGTTACTGGCCATGGTAATTGTTGCTATCTATAGATCAAGCCAATCGAAGCACTTGATGAAAGGTTCTAGCAGAACTGGGCAAGGCATGTTGAATGGCCCTCCTAAACTTGTAATTCTTCATATGGATATGGCTATCCACACCTTTGATGATATCATGCGAAGTACAGAGAATCTCAGTGAGAAATATATCATAGGGTATGGTGCCTCAAGTACTGTATACAAGTGTGTCTTGAAAAATTCCCGACCAATTGCAATCAAGCGATTGTACAACCAGCATCCACACAATCCAAGGGAATTTGAAACAGAACTTGAAACGATTGGCAGCATTAGACATAGAAACCTTGTCACTTTGCATGGTTATGCCCTTACTCCGAACGGGAATCTCCTTTTCTATGACTATATGGCTAATGGCTCTCTGTGGGACCTTCTACATGGTCCCCTGAAGGTGAAACTTGATTGGGAAACACGGTTGAGGATAGCTGTTGGAGCTGCTGAAGGACTTGCTTATCTCCATCATGACTGCAACCCTCGAGTTGTTCACAGGGACATAAAGTCTTCAAATATTTTACTGGATGTGAACTTTGAGGCTCACCTCTCTGATTTTGGCATTGCAAAATGTATCTCAACGACAAGAACTCACACATCCACTTATGTTCTTGGGACTATAGGCTATATTGACCCTGAGTATGCCCGAACATCTAGGCTGAATGAGAAATCAGATGTATACAGCTTTGGCATTGTTCTGCTAGAGCTACTAACTGGGAAGAAGGCAGTGGACAATGAGTCTAATTTGCATCAGCTGATATTGTCCAAGGCAGATAACAACACTGTAATGGAGGCTGTGGATCCCGAGGTCTCCATTACCTGCATTGATTTAGCCCATGTTAAGAAGACCTTCCAGCTTGCATTGCTTTGCACAAAAAGGAACCCTTCTGAGAGGCCTACCATGCATGAAGTTGCTAGGGTGCTGGTATCACTTCTTCCTGCACCTCCAAGTAAAGTCCTTGCTGCACCTGCCAAGACTCTTGATTATGCTCATTATGTGATTGACAAGGGACAAAACCAACGAAAAATGGAAGGGCTACGACCCATGCAGGATAACAATTCATCTGATGCTCAATGGTTTGTTCGCTTCGGGGATGTTATTTCCAAGAGCTCCCTCTAG 2997 0.4144 MEDDGLVLLFYGSHRKLRFLFFPMAMVVLMLLLLSPFASPLSEEGQALMAIKASFSNIADVLLDWDDVHDDDFCSWRGVFCDNVSLTVISLNLSSLNLGGEISPAIGDLGNLQSIDLQGNKLTGQIPDEIGNCAELIHLDLSDNQLYGDIPFSISKLKQLEFLSLKSNQLTGPIPSTLTQIPNLKTLDLARNKLTGDIPRLLYWNEVLQYLGLRGNMLSGTLSPDICQLTGLWYFDVRGNNLTSTIPDSIGNCTSFEILDISYNQISGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAILDLSENELVGSIPPILGNLSFTGKLYLHGNKLTGPIPPELGNMSKLSYLQLNDNQLVGKIPDEIGKLEHLFELNLANNHLDGSIPHNISSCTALNQFNVHGNKLSGSIPLSFRSLESLTDLNLSANNFKGIIPVELGHIINLDTLDLSNNNFSGHVPASVGYLEHLLTLNLSHNSLDGALPADFGNLRSIQIIDMSFNNLSGSIPPEIGQLQNLVSLILNNNDLRGKIPDQLTNCFSLSSLNFSYNNFSGVVPSMKNFSRFSADSFIGNPMLCGNWVGSICRPYLPKSREIISRVAVVCLTLGIIMLLAMVIVAIYRSSQSKHLMKGSSRTGQGMLNGPPKLVILHMDMAIHTFDDIMRSTENLSEKYIIGYGASSTVYKCVLKNSRPIAIKRLYNQHPHNPREFETELETIGSIRHRNLVTLHGYALTPNGNLLFYDYMANGSLWDLLHGPLKVKLDWETRLRIAVGAAEGLAYLHHDCNPRVVHRDIKSSNILLDVNFEAHLSDFGIAKCISTTRTHTSTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNESNLHQLILSKADNNTVMEAVDPEVSITCIDLAHVKKTFQLALLCTKRNPSERPTMHEVARVLVSLLPAPPSKVLAAPAKTLDYAHYVIDKGQNQRKMEGLRPMQDNNSSDAQWFVRFGDVISKSSL* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02839 998 SUPERFAMILY L domain-like 323 579 - -
Rops6g02839 998 SMART LRR_typ_2 348 371 IPR003591 -
Rops6g02839 998 SMART LRR_typ_2 300 324 IPR003591 -
Rops6g02839 998 SMART LRR_typ_2 181 205 IPR003591 -
Rops6g02839 998 SMART LRR_typ_2 109 133 IPR003591 -
Rops6g02839 998 SMART LRR_typ_2 516 540 IPR003591 -
Rops6g02839 998 SMART LRR_typ_2 229 253 IPR003591 -
Rops6g02839 998 SMART LRR_typ_2 157 180 IPR003591 -
Rops6g02839 998 SMART LRR_typ_2 468 491 IPR003591 -
Rops6g02839 998 SMART LRR_typ_2 372 396 IPR003591 -
Rops6g02839 998 SMART LRR_typ_2 420 443 IPR003591 -
Rops6g02839 998 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 41 205 - -
Rops6g02839 998 Pfam Protein kinase domain 672 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02839 998 Pfam Leucine Rich repeat 182 197 IPR001611 GO:0005515
Rops6g02839 998 Pfam Leucine Rich repeat 252 269 IPR001611 GO:0005515
Rops6g02839 998 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 180 935 - -
Rops6g02839 998 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 640 744 - -
Rops6g02839 998 Pfam Leucine rich repeat N-terminal domain 42 82 IPR013210 -
Rops6g02839 998 SUPERFAMILY Protein kinase-like (PK-like) 648 934 IPR011009 -
Rops6g02839 998 Gene3D Ribonuclease Inhibitor 299 588 IPR032675 -
Rops6g02839 998 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 316 589 - -
Rops6g02839 998 SUPERFAMILY L domain-like 43 335 - -
Rops6g02839 998 Gene3D Ribonuclease Inhibitor 41 203 IPR032675 -
Rops6g02839 998 Gene3D Ribonuclease Inhibitor 204 295 IPR032675 -
Rops6g02839 998 ProSiteProfiles Protein kinase domain profile. 669 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02839 998 Gene3D Phosphorylase Kinase; domain 1 643 744 - -
Rops6g02839 998 Pfam Leucine rich repeat 446 505 IPR001611 GO:0005515
Rops6g02839 998 Pfam Leucine rich repeat 111 170 IPR001611 GO:0005515
Rops6g02839 998 Gene3D Transferase(Phosphotransferase) domain 1 745 943 - -
Rops6g02839 998 ProSiteProfiles Leucine-rich repeat profile. 183 205 IPR001611 GO:0005515
Rops6g02839 998 ProSitePatterns Protein kinases ATP-binding region signature. 675 697 IPR017441 GO:0005524
Rops6g02839 998 SMART serkin_6 669 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02839 998 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 206 315 - -
Rops6g02839 998 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 745 944 - -
Rops6g02839 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02839 Rops-Chr6 50951841 50958871 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02839 111 998 Receptor kinase-like Gene Family AT5G07180 77.165 0.0 1366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Rops6g02839 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02839 K20718 - gmx:100811653 1711.81