Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02830 ATGAAGTTCATAGATTTCCTCTTTGCTTTGAAACCTCTTTTTCCAACACTAGTTGCTGTCACTTTAGTTGCTTTTATCATCAAAATCCATGGCAGTAGGTTTGTTCACAAGAAAAGAAGGTACCACCCTGTTGCTGGCACGGTCTTACACCAACTGTTCAACTATCATAGGCTGCTCGAGTACATGACCGACCTTACAAGCAAGAGAAAAACTTACAGGTTGCTTAGCTTCATCAGAAGTGAGGTGTACACTGCAGACCCTGTTAATATTGAGCATATGCTTGTGACAAACTTCTCAAACTACGGCAAGGGTTGGTATCACCATAGTGTCTTGACAGATCTATTGGGAGATGGTATATTCACAGTGGATGGAGAGAAGTGGCGACATCAGAGAAAGGCAGCAAGTTATCAATTCTCAACTAAGCTGTTGAAAGACTTCAACAGTTCAGTGTTCAAATCCAATGCAGTAAAACTTGCAGGGATAGTGTCTGAAGCTGCAATCTCAAACAATATTATTGAGCTGCAGGTTGTCCTTGGTGTAGAATTGGACACCATGCGTGGAACCTATAAAGAAGGCACACAATTCTCCAATGCTTTTGATGAAGCAAGTGCTGCTATAATGTTTCGGTATTTCAACTTTCTCTGGAAGATTAATCGGTTCATGAACATTGGATCGGAAGCAGTTCTAAGGAAAAGCCTAAGAGTGGTTGACGAATACGTGTATAAACTAATCAGGAGCAAGATTGAGCAAGCCCAGAAGCAACAAAATAATTTTCCTGAGATGAAAGGAGACATTTTGTCAAGGTTTATAGAATTAAAAGAGACAGATCCAAAGTACCTTAAAGACATTATCTTGAGTTTTATCATTGCAGGGAAAGATACAACAGCAATTACTCTTTCCTGGTTCCTTTACCAACTCTGCAAGCATCCTCGTGTGCAGGAGAAGATTGCACAAGAAATTAGGGAGGCAACAAAAGTAGCAAATGGATCAAGCATTGATGAACTTGCAGCTCAATTAACAGAAGAAAACCTGGAAAAGATGCAGTATCTGCATGCAGCTTTGAGTGAAACACTAAGACTCCACCCAGCAGTTCCAGTGGAAGGGAAGTTTTGTTTTTCAGATGACACATGGCCAGATGGATTTAGTGTCAGGAAAGGTGATCTTGTGTCATTCCAACCATATGTCATGGGAAGGATGAAATTCTTGTGGGGTGAAGATGCTGAACAATTCCGACCAGAGAGATGGCTTGATAAAGATGGAAATTTCCAGAAAGAAAGCCCTTTTAAGTTCACAGCCTTCCAGGCGGGTCCAAGAATTTGCCTGGGCAAGGAATTTGCATACAGACAGATGAAGATATTTTCTGTTATCTTGTTAGGTAGCCATAGCTTCAAACTAGCAGACAAAAATAAATCAGCAAAATACAGAACCATGCTCACTCTACAAATTGATGGTGGCCTCCACGTGTGTGCTTCTAAGAGAGAGAAATAA 1488 0.4079 MKFIDFLFALKPLFPTLVAVTLVAFIIKIHGSRFVHKKRRYHPVAGTVLHQLFNYHRLLEYMTDLTSKRKTYRLLSFIRSEVYTADPVNIEHMLVTNFSNYGKGWYHHSVLTDLLGDGIFTVDGEKWRHQRKAASYQFSTKLLKDFNSSVFKSNAVKLAGIVSEAAISNNIIELQVVLGVELDTMRGTYKEGTQFSNAFDEASAAIMFRYFNFLWKINRFMNIGSEAVLRKSLRVVDEYVYKLIRSKIEQAQKQQNNFPEMKGDILSRFIELKETDPKYLKDIILSFIIAGKDTTAITLSWFLYQLCKHPRVQEKIAQEIREATKVANGSSIDELAAQLTEENLEKMQYLHAALSETLRLHPAVPVEGKFCFSDDTWPDGFSVRKGDLVSFQPYVMGRMKFLWGEDAEQFRPERWLDKDGNFQKESPFKFTAFQAGPRICLGKEFAYRQMKIFSVILLGSHSFKLADKNKSAKYRTMLTLQIDGGLHVCASKREK* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02830 495 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02830 495 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02830 495 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02830 495 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02830 495 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02830 495 CDD CYP86A 70 486 - -
Rops6g02830 495 Gene3D Cytochrome P450 38 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02830 495 Pfam Cytochrome P450 44 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02830 495 SUPERFAMILY Cytochrome P450 41 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02830 495 PANTHER CYTOCHROME P450 27 488 - -
Rops6g02830 495 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02830 495 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02830 495 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02830 495 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02830 Rops-Chr6 50770289 50773558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02830 18 493 Cytochrome P450 AT2G45510 50.699 1.36e-168 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02830 - - pvu:PHAVU_007G063800g 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02830 6 50770289 50773558 Rops6g02830 6 50770289 50773558 ECH