Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02824 ATGCCTTCTCCACAACCATCCACGTCAGCATGTTCTCTGTTCGTGCTTCTCCTTCTCTGTCTCCGGAAGCGGAAGAAACGCACCACTCCTTCCTCCGACACCGACTCCGACTCCAACCCCCCTCACCCCTTCTCCTACACCCTCCTCCGCCGTGCCACCAACTCCTTCTCCACCCTCCTCGGCCACGGTGGCTTCGGCCCTGTCTTCTCCGGCTCCCTCTCAGGAAAACCCGTCGCCGTCAAGCTCATGGACTTAACGCCTCTCCAAGGAGAACGCGAGTTCCACAACGAACTCTTCTTCGCTTCGAAACTCCGTTCCCACCTCGTAGTCCCCGCCATCGGGTTCTCCTCCGACCCTAAACGCCGTCGTTTCTTGTTGGTTTACGATCTTATGCACAACGGTAACCTCCACGACGCCCTTCTTCGTCGTAAGTGCCCTGAACTCATGCTATGGAAGAACCGCTTCTCCATCGCCGTTGACATTGCTAAAGGGATTCACTACCTTCATTCCTCCGACCCACCAATCATTCACGGTGATATTAAGCCCAGTAACGTTCTTCTTGACCGTTGCTTTAATGCCAAAATCGCAGATTTTGGACTTGCGAGGTTGAAAACAGAACCCCAGTTTGTAATACAAGTGGAAAGTGAGAACAAGAGAAAGGAAGAGTTGGATAGTGATGGTGGGTCGGTGGTGGAGGAAACTGAGAGTGTGAATACTGAGCAATCATTTGAAGGTGAGATAGATGTGAAGAAGAATGGTAAGGGGTTGAGTAGTAGCAATGAGAATGGGAGAGTGAAGGATTATGTGATGGATTGGATTGGAAAGGAGGTAAATGGGGAAAGGCCAAAAGGGGAATGGGTAGGTGCTGCTTCTTCTAGCGGTGGGACTGGAAAGACAGAGAAAAAGAAGAGCTTGAAGAAATTGGAGTGGTGGGAATCAATGAATGAGGAAAAGGGTGTTAATGCTGGAGTTTTGAAGAAGGACAAGAGAAGGCCTGCAAGGGAATGGTGGAAGGAGGAGTATTCTCAAGAGCTTGAGAAGAAGAATAAAAAGAAGAAGAAAAAGAAAAAGGGTGGAAACAGTGATGATAATTGGTGGGAGAGAGATGATGATGATGATGATGCTTTGTATGGTGATGTAAAAAGAAGTAATGGAAAAAACCGTAGTAGGAACAGTCGTGGTGGTAGTGTACATTCTTTGTTCAGTGGGGAACTAAGGAGTGCTCGGTGGAATAGCTTTGATTCTGGTAGTGGAGAAATTCCAAAGAGTGGTGGTATTAGCAGTACTCCAAGTATGAGGGGAACCATTTTTTATGTTGCTCCTGAGTATGGCTATAATGGAGATGTATCTGAGAAGTGTGATGTGTATAGTTTTGGGGTCTTATTGCTTGTTATCATTTCTGGGAGGCGTCCACTTCAGGTGACTGGTTCACCCTTATCAGAGTTTCAGAGAGCAAATCTTGTGTCTTGGGCTCGCCATTGTGCTCGCAATGGGAAGCTTCTTGAACTTGTTGATCAGTCTATTCAGTCATTGGATAAAGAGCAGGCTCTTCTCTGCATCAAGGTTGCATTGCTTTGTTTGCTTAAGTCACCTGCTCGTCGTCCTTCAATGAAAGAGATTGTGGGAATGCTTAGTGGGGAATTGGAGCCACCCCAGTTGCCAATTGAGTACTCAAAATCTCACTTCCCATTCAAGTCTAGGAAAGAAGCCCGGTGA 1716 0.4744 MPSPQPSTSACSLFVLLLLCLRKRKKRTTPSSDTDSDSNPPHPFSYTLLRRATNSFSTLLGHGGFGPVFSGSLSGKPVAVKLMDLTPLQGEREFHNELFFASKLRSHLVVPAIGFSSDPKRRRFLLVYDLMHNGNLHDALLRRKCPELMLWKNRFSIAVDIAKGIHYLHSSDPPIIHGDIKPSNVLLDRCFNAKIADFGLARLKTEPQFVIQVESENKRKEELDSDGGSVVEETESVNTEQSFEGEIDVKKNGKGLSSSNENGRVKDYVMDWIGKEVNGERPKGEWVGAASSSGGTGKTEKKKSLKKLEWWESMNEEKGVNAGVLKKDKRRPAREWWKEEYSQELEKKNKKKKKKKKGGNSDDNWWERDDDDDDALYGDVKRSNGKNRSRNSRGGSVHSLFSGELRSARWNSFDSGSGEIPKSGGISSTPSMRGTIFYVAPEYGYNGDVSEKCDVYSFGVLLLVIISGRRPLQVTGSPLSEFQRANLVSWARHCARNGKLLELVDQSIQSLDKEQALLCIKVALLCLLKSPARRPSMKEIVGMLSGELEPPQLPIEYSKSHFPFKSRKEAR* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02824 571 SUPERFAMILY Protein kinase-like (PK-like) 38 558 IPR011009 -
Rops6g02824 571 Gene3D Transferase(Phosphotransferase) domain 1 409 552 - -
Rops6g02824 571 MobiDBLite consensus disorder prediction 217 243 - -
Rops6g02824 571 ProSiteProfiles Protein kinase domain profile. 54 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02824 571 PANTHER OS07G0586332 PROTEIN 260 570 IPR044576 -
Rops6g02824 571 Coils Coil 338 358 - -
Rops6g02824 571 MobiDBLite consensus disorder prediction 344 397 - -
Rops6g02824 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Rops6g02824 571 SMART serkin_6 54 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02824 571 MobiDBLite consensus disorder prediction 279 303 - -
Rops6g02824 571 Pfam Protein tyrosine and serine/threonine kinase 431 543 IPR001245 GO:0004672|GO:0006468
Rops6g02824 571 Pfam Protein tyrosine and serine/threonine kinase 57 206 IPR001245 GO:0004672|GO:0006468
Rops6g02824 571 Gene3D Transferase(Phosphotransferase) domain 1 43 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02824 Rops-Chr6 50676532 50679218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02824 422 544 Receptor kinase-like Gene Family AT3G58690 33.333 1.08e-11 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Rops6g02824 PK_Tyr_Ser-Thr 1.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02824 - - aprc:113872924 741.495