Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02822 ATGCACTTGAAATGTTTATGTTGTTGTTTTCTCTCTGAAGAAGAACAAACACAGAGACGGAATGTCAACAACAAGAAAAATACAGATTATCCATGGGAAATATACACCTTGAAGGAGTTGCTTCGTGCAACAAACAACTTCCATCAAGATAACAAGATTGGAGAGGGTGGATTTGGAAGTGTTTATTGGGGTCGAACAAGTAAAGGCGTCGAGATCGCTGTGAAGCGGTTGAAGACTATGACTGCAAAGGCAGAGATGGAGTTTGCAGTTGAAGTTGAAGTACTTGGAAGGGTGAGGCATAAGAATTTGTTGGGCTTGAGGGGATTCTATGCAGGAGGAGATGAAAGGTTGATTGTTTATGATTACATGCCTAATTATAGCTTACTCACCCATTTGCATGGTCAACTTGCTACGGATTGTTTACTAGATTGGCCTAAAAGAATGAGCATAGCAATTGGAGCAGCTGAAGGTTTAGCGGATATTGTTCAGTGGGTCACACCTTATGTCCAAAAGGGTGTCTTCAAGCATATTGCTGATCCAAAGTTGAAGGGGAATTTTGATATAGAACAATTGAAATCTGTGATCATGGTAGCTATGAGATGCACAGATGGTAGCCCAGATAAGAGGCCTAGCATGTTGGAGGTGGTGGAATGGCTTAAAGGGGGTGTTGGGAAGAGAAAGAAAGAGATTCCAAATTTGAGTTACCAGAATGGAGACGAAGAAAATGACGAAAACTACAAAGAGAAGTCCAAGTTGAAAATACTAGGTGAAAATGATAGGCTTAAAATAAGATAA 795 0.4038 MHLKCLCCCFLSEEEQTQRRNVNNKKNTDYPWEIYTLKELLRATNNFHQDNKIGEGGFGSVYWGRTSKGVEIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGDERLIVYDYMPNYSLLTHLHGQLATDCLLDWPKRMSIAIGAAEGLADIVQWVTPYVQKGVFKHIADPKLKGNFDIEQLKSVIMVAMRCTDGSPDKRPSMLEVVEWLKGGVGKRKKEIPNLSYQNGDEENDENYKEKSKLKILGENDRLKIR* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02822 264 SUPERFAMILY Protein kinase-like (PK-like) 161 224 IPR011009 -
Rops6g02822 264 MobiDBLite consensus disorder prediction 230 249 - -
Rops6g02822 264 Pfam Protein tyrosine and serine/threonine kinase 48 159 IPR001245 GO:0004672|GO:0006468
Rops6g02822 264 PANTHER OS01G0253100 PROTEIN 161 225 - -
Rops6g02822 264 Gene3D Phosphorylase Kinase; domain 1 8 122 - -
Rops6g02822 264 SUPERFAMILY Protein kinase-like (PK-like) 22 161 IPR011009 -
Rops6g02822 264 ProSiteProfiles Protein kinase domain profile. 47 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02822 264 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Rops6g02822 264 Gene3D Transferase(Phosphotransferase) domain 1 159 231 - -
Rops6g02822 264 FunFam PTI1-like tyrosine-protein kinase At3g15890 18 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02822 Rops-Chr6 50600021 50601484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02822 16 159 Trihelix Transcription Factor Family AT1G68690 43.056 7.27e-31 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Rops6g02822 PK_Tyr_Ser-Thr 1.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02822 - - gmx:100815397 295.819