Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02821 ATGGATCCCTACAAGGCACTCCACATCATCCTCAACCCAAACGGCACCCTCACACGCTTAGATACACCCCCACAAAGCCCTCCCTCACCTGATCCCTCCCTCTCTACACCCGTTCTCTCCAAAGACCTCACCATCAACCAATCAAACCACACCTGGGCCCGGATCTACCTACCCCACAAAGCACTGGATAATCCTCCACACCACTTCAAGCTACCCCTCATTGTTTTCTACCATGGTGGCGGCTTCATTTTCTACAGCGCCGCCTCTACTTATTTTCACGATTTCTGCGTCAACATGGCCAACCACACCCAATCCGTCGTCGTTTCAGTTGACTACCGCCTCGCCCCAGAACACCGTCTTCCAGCGGCTTATGAGGACTCCGTGGAAGCGCTGCACTGGATCAAAACCTCTAATGATCCGTGGTTGACGCGTCATGCTGATTATTCCAATTGTTATCTCATGGGGGAGAGTGCCGGGGGTAATATTGCCTACGATACGTGCAGCCGCAGAGGTTGA 516 0.531 MDPYKALHIILNPNGTLTRLDTPPQSPPSPDPSLSTPVLSKDLTINQSNHTWARIYLPHKALDNPPHHFKLPLIVFYHGGGFIFYSAASTYFHDFCVNMANHTQSVVVSVDYRLAPEHRLPAAYEDSVEALHWIKTSNDPWLTRHADYSNCYLMGESAGGNIAYDTCSRRG* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02821 171 Pfam alpha/beta hydrolase fold 74 167 IPR013094 GO:0016787
Rops6g02821 171 MobiDBLite consensus disorder prediction 15 39 - -
Rops6g02821 171 SUPERFAMILY alpha/beta-Hydrolases 26 167 IPR029058 -
Rops6g02821 171 PANTHER ARYLACETAMIDE DEACETYLASE 11 166 - -
Rops6g02821 171 Gene3D alpha/beta hydrolase 4 171 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02821 Rops-Chr6 50596716 50597231 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02821 9 164 Carbohydrate Esterase AT3G48700 40.123 7.53e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02821 - - gmx:100777262 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00782 5 14690534 14691587 Rops6g02821 6 50596716 50597231 PCT
Rops6g02821 6 50596716 50597231 Rops5g00779 5 14653511 14654497 PCT