Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02820 ATGTCAAGTCAACCCTTCTCGTTTCACGCCGTTGATCCCTTCCACCATCTAAAAATCGCCCTCAACTCCGACGGCACAATCACTCGCCTGCGTGGAGATCCACACGCCTCACCCTCACCCGATCCCAACGTTCCCATCCCCGTTCTCACCAAAGACGCCACCATCAACGAATCAAACAACACCTCAGTTCGAATATTCCTACCCCGCAAAGCACTCGATCACTCCTTCCCCAACAACAACAACAAGAAGCTCCCTCTCATCGTTTACTTCCATGGGGGCGGCTTTGTACTTTTCCGTGCAGCCTCAGATTTCCTTCATAATCTCTGCGTGAACCTCGCAAACGACGTCGGCTCCATTGTCGTATCCGTAGATTACCGTCTTGCCCCGGAACATCGATTACCAGCTGCGTACGATGATGCCGTGGAAGCGTTGCACTGGATCAAAGCCCAAACAAATGACTGGTTGCGAAACTATGCTGATTATTCCAATTGTTACCTCATGGGAGGTAGTGCTGGAGCAAACATCGCATACCACGCGGGTCTGCGTGTGGCTGCGGAGGTTATTAATAATGATGATTATCTGGAGCCCCTGAAGATCAGAGGGCTGATATTGAACCAACCGTTTTTTGGTGGGACCAAGAGGGTGCCCTCGGAGGTGAGGCTGATGAATGATCCGGTGTTGCCGCCGCACGCGAGTGACTTGTTGTGGGAATTGTCGTTGCCAGTTGGGGTTGACCGTGATCATGAGTATTGCAATCCAGGGGCTGGGGATGGTCCTAGGGTTTTGGAAAGAGTTGGGTGGAGGGTGCTGGTGAACGGGTGCGAAGGGGACCCACTGGTGGATCATCAGATGGCAGTGGCCAGACTGATAGAGGAAAAGGGTGTGGAAGTAGTGAGCCGTTTTGACAGTGGAGGTTGGCACGGGGTTGAGGTTCGTGATCCCATCAAACTCAAACAACTGCATCACCTAATCAAAGATTTCATTGCTTCCTCTTCTTCCTGA 1002 0.52 MSSQPFSFHAVDPFHHLKIALNSDGTITRLRGDPHASPSPDPNVPIPVLTKDATINESNNTSVRIFLPRKALDHSFPNNNNKKLPLIVYFHGGGFVLFRAASDFLHNLCVNLANDVGSIVVSVDYRLAPEHRLPAAYDDAVEALHWIKAQTNDWLRNYADYSNCYLMGGSAGANIAYHAGLRVAAEVINNDDYLEPLKIRGLILNQPFFGGTKRVPSEVRLMNDPVLPPHASDLLWELSLPVGVDRDHEYCNPGAGDGPRVLERVGWRVLVNGCEGDPLVDHQMAVARLIEEKGVEVVSRFDSGGWHGVEVRDPIKLKQLHHLIKDFIASSSS* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02820 333 Gene3D alpha/beta hydrolase 14 332 IPR029058 -
Rops6g02820 333 PANTHER ARYLACETAMIDE DEACETYLASE 20 308 - -
Rops6g02820 333 Pfam alpha/beta hydrolase fold 87 309 IPR013094 GO:0016787
Rops6g02820 333 SUPERFAMILY alpha/beta-Hydrolases 15 316 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02820 Rops-Chr6 50591229 50593910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02820 19 313 Carbohydrate Esterase AT5G16080 34.853 8.31e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02820 - - gmx:100777786 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02820 6 50591229 50593910 Rops6g02820 6 50591229 50593910 ECH
Rops5g00783 5 14698596 14699570 Rops6g02820 6 50591229 50593910 PCT
Rops6g02820 6 50591229 50593910 Rops5g00782 5 14690534 14691587 PCT