Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02814 ATGGGTAAGGAGTGGTATTGGGGTGGAAGGTCCTCCAAGAGAGGTGGAGGAGCTGAAACAGAAATCCCTTCTGGTTGCATGTGTGCAGTCTTTCAGGCCTTTGATTTTCATCCATTTCACTTTTCCTTAAACCAGCAACAATCCTCTTCCAAGTCTGCCTCTCGCATCCCAGTCTCAGATCACTACAGTGTCCCCAAAGGAGCTGAAGCACCTAGGAATAGCTTGGAATCAGAAGATGGTACATTTTCATCCATCTCAAAAGAAGAAAATTTAAAAATCCCAAAGAACATACGAATCAAAACAAGTGGAAGCACAATATCAAGAGCAGGAAGTTTGAGTGATTTTTCCTCAGAAATCATCAGCTCTCCAGGGACCAAGACACCAACTTTGGTTGCAAGATTAATGGGTCTTGATCTTCTTCCTGATGCAAATTCCTCCTCCTCATCTTCTTCTTCATGTCTTTCCACTCCAAACAGACAAGGCCATCCACATCAGCACCACAATAGACCAAGGCAACACATCCAAATAATGAAACATAGAAACAGCATAGACAGTGACCATGTAGCCATGCGTTCCTTGCCTGAGACTCCAAGAATGTCCTCAGCAAGAAGATCAGATGTTGAGCATAGACTCTCTCTCCAAATCAACAAGGAGAATATGGGCCTTGGTGAGGATTTGGAGTTTCCTCGGTTTTCATTTTCAAAGAGGAAATATGAAGAGAACAATGGCAGAAGTCCAAGCCATTATGCAAGGCAAATTGTGAAACAGGTTAAAGAAAGTGTAAGCAGGAAAGTTGGGCTTGACATCACCAACACTGTCAAAAACAGAGAACAAGGAAGAGAAGAATTTGTTGGCCAATTCAAATCCAAGAAACCTTTCAAGAAATCACTAGATGAATCCAGCCCAGGAAAGCACTCAAACCAATCTTACTCTCCAAGACTCAGCAGATTCATGGATGCCAAAAACAAACCAAGTACAAAACCATCACCAATCACTCCAAAAGACCAAAACACAAGCCCGGTACTAAAACAAGCATCACCTCCACCTGTGGTCAACATTGAAGCACAGCTTCCAAGAGTTTCAACAAAGCCAAAGCCTAAAGCATTGCACCAGATGGAGTTGCATAACCAAAAATCAGTCCCAAAATGCAAGAAAACCACCCAGGGAAAATTGAGTTCACGGCTCAATAAGCCTCCACAGACATCAATCAGAAACAAGCGAGAAGACTCATTTATTGTCCGACCTCCATCAAACACTAGAGCCAATGACACCAAAACCAAAAGCCAGAAAACTCATCCACTTTCAACCAATCTTCTCAATAACCTCAACACTGTCCCAAATCTTCTCCCTGTCAAGAAAGACCCTTCTCCTCCAGCAACCAAAATTCCTCAAAAACAGTCACAGGTATCTGATGACATCCAAGAAGCCAAACACAGCGCACAGTTATTTAGTTGTTCGCGCCAATCGTACAAACAAGAACCTCCGCACACTCTCGCCACCCGAGAAACCAACCATGAAGACAAATCTAACGGTGCCTTCACCGCCACCGGAGCTAACGATGAAGGACCAGAATATCATTACGTCACAACCATTATAAGCCGTAGTGGGGTCCACAAAGCCAAATTACCCCACTTCCATTTTCAATGGTTCTCTTCTACACATCCATTAGACCCTTCACTTTTTCACCGTCTTGAGCACTACCCATCATCCAATTCCTTTGCTTTTCCCCCCTACGACAAGAAAGATTGCAACTTTACGAAGAAAAACCATCTGGGTCCACGTTGCAACCGTAGGTTACTGTTTGATTTGGTCGATGAAGTGCTGTCGGAGATTCTGGTTAGGCCAAAGTGTTATCGTGGGTTGTTGTTGGAGACAGTGTGGAAGAGGGTTCGGAGTTTCCCACGTGCGAAATGCGAGTTTTTGGAAGACATAGATGGGTTGATAGAGATTGAGGACATGAAGGAAGAAGAAGGAGAAGGGTTGGTGGCGGAGATAGAAGGGAAGATAATGGAGAGTTTGGTGCATGAAACGTTAACCGTTATGGTTGGTGACGGCGTGGAGGAGAAAGGGTGGTGGGTCCGTACGTAG 2088 0.443 MGKEWYWGGRSSKRGGGAETEIPSGCMCAVFQAFDFHPFHFSLNQQQSSSKSASRIPVSDHYSVPKGAEAPRNSLESEDGTFSSISKEENLKIPKNIRIKTSGSTISRAGSLSDFSSEIISSPGTKTPTLVARLMGLDLLPDANSSSSSSSSCLSTPNRQGHPHQHHNRPRQHIQIMKHRNSIDSDHVAMRSLPETPRMSSARRSDVEHRLSLQINKENMGLGEDLEFPRFSFSKRKYEENNGRSPSHYARQIVKQVKESVSRKVGLDITNTVKNREQGREEFVGQFKSKKPFKKSLDESSPGKHSNQSYSPRLSRFMDAKNKPSTKPSPITPKDQNTSPVLKQASPPPVVNIEAQLPRVSTKPKPKALHQMELHNQKSVPKCKKTTQGKLSSRLNKPPQTSIRNKREDSFIVRPPSNTRANDTKTKSQKTHPLSTNLLNNLNTVPNLLPVKKDPSPPATKIPQKQSQVSDDIQEAKHSAQLFSCSRQSYKQEPPHTLATRETNHEDKSNGAFTATGANDEGPEYHYVTTIISRSGVHKAKLPHFHFQWFSSTHPLDPSLFHRLEHYPSSNSFAFPPYDKKDCNFTKKNHLGPRCNRRLLFDLVDEVLSEILVRPKCYRGLLLETVWKRVRSFPRAKCEFLEDIDGLIEIEDMKEEEGEGLVAEIEGKIMESLVHETLTVMVGDGVEEKGWWVRT* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02814 695 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 684 - -
Rops6g02814 695 MobiDBLite consensus disorder prediction 142 161 - -
Rops6g02814 695 MobiDBLite consensus disorder prediction 325 345 - -
Rops6g02814 695 Pfam DUF761-associated sequence motif 117 146 IPR032795 -
Rops6g02814 695 MobiDBLite consensus disorder prediction 487 518 - -
Rops6g02814 695 MobiDBLite consensus disorder prediction 280 350 - -
Rops6g02814 695 MobiDBLite consensus disorder prediction 142 171 - -
Rops6g02814 695 MobiDBLite consensus disorder prediction 280 301 - -
Rops6g02814 695 MobiDBLite consensus disorder prediction 415 447 - -
Rops6g02814 695 MobiDBLite consensus disorder prediction 381 400 - -
Rops6g02814 695 MobiDBLite consensus disorder prediction 375 471 - -
Rops6g02814 695 MobiDBLite consensus disorder prediction 50 87 - -
Rops6g02814 695 Pfam Domain of unknown function (DUF4378) 524 676 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02814 Rops-Chr6 50482872 50485437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02814 97 695 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 34.259 2.10e-59 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02814 - - gmx:102659931 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02814 6 50482872 50485437 Rops6g02814 6 50482872 50485437 ECH
Rops5g00786 5 14887553 14891324 Rops6g02814 6 50482872 50485437 PCT