Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02806 ATGGCTGTTGCCGAGAGCAACAGCAGCAGTGAACCTTCCACTTCATACAATTGTTATAAAGTAGCAAGCTTGACTCAAGCCATATTAGACACAAAGCAAACTTGTAATTTGAAAGATCGATACATTCTTGGGGAGCAGTTGGGTTGGGGACAGTTTGGTGTCATAAGAGCATGCTCTGACAAATTGACCGGAGAGGTTTTGGCCTGCAAATCAATTGCTAAAGATAGGTTGGTTACTTCAGATGATCTGCAGAGTGTTAAACTTGAGATTGAGATAATGGCCAAGTTATCCGGGCACCCAAATGTTGTAGATCTCAAGGCAGTTTATGAAGAGGAGGATTTTGTTCATTTGGTGATGGAGCTTTGTGCTGGTGGGGAGTTGTTTCACCTGTTAGAGAAGCGGGGGCGATTTTCTGAATCTGAAGCTAGGGTTCTCTTTAGACATCTTATGCAGATGGTTATGTATTGCCATGAAAATGGGGTTGTTCATAGAGATTTGAAGCCTGAGAACATTCTCTTGGTGACTAGATCCTCCTCATCTCCAATTAAATTGGCAGACTTTGGGCTTGCAACCTACATCAAGCCTGGACAGAGTTTGCATGGGTTAGTTGGGAGTCCATTTTATATAGCTCCAGAGGTTCTGGCAGGTGCATATAATCAGGCTGCTGATATTTGGAGTGCAGGGGTTATTCTTTACATTCTACTGAGTGGGATGCCTCCATTTTGGGGAAGGACAAAATCACGGATATTTGAAGCTGTTAAGGCTGCCGACTTGAGGTTCCCATCTGAACTGTGGGATCACATTTCTGAATCTGCTAAGGATTTGATTAGGGGAATGCTCTGCATAAATCCTTCTCAAAGGCTCACTGCCCGGGAGGTTCTGGATCATTGCTGGATGGAAAGCAATCAAACAATTCCTGAACAACTAAGCGAACATAAAATCGGAAGTTGTGGAGAGTGGGATGTTGGTAGCAACTCATTCTCTGCCTCATTTATGTCCAGGAATCAGGACATCAGCTTTGGCGCTGGATCACCTACATGTGAAGCTCAGTCACCTACATTCACATGCAAATCATCATTTTCTTCCATTTTTGTGGAACCAGTGACACCTTGTCCTGTTTCTGGTGGGTTTTCATTTCTGAGCACAGGTGGCTCCACTGATTTGGAATTTTCTTCTCCCATTCCCTCAATGCCTAGCTTTGCATTTCTCAGCCCCAGTCCTGTTGTTGAGCAAAGGAGTCGTACATTAGAGCTCTCAACTACCACGTCAGAAGTAAATGCAATTGCTGGTGAAATGGATTGCAAGCCTGTAGAGGCTAAAAGGGTAGGTGGATCAAATGGGAATAGAGCATTGGGATTCCACAGCAAGAGAAACCAGACAATTGGACTCGGGGAGCGTGAGCAACTTGATTTTGTGGTGACTGAATCAGTCATTAGGTGGTCATCATGCACACAACTTCCTACATCACCAAGATCATCTCTTGTCTGTTGA 1491 0.4427 MAVAESNSSSEPSTSYNCYKVASLTQAILDTKQTCNLKDRYILGEQLGWGQFGVIRACSDKLTGEVLACKSIAKDRLVTSDDLQSVKLEIEIMAKLSGHPNVVDLKAVYEEEDFVHLVMELCAGGELFHLLEKRGRFSESEARVLFRHLMQMVMYCHENGVVHRDLKPENILLVTRSSSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNQAADIWSAGVILYILLSGMPPFWGRTKSRIFEAVKAADLRFPSELWDHISESAKDLIRGMLCINPSQRLTAREVLDHCWMESNQTIPEQLSEHKIGSCGEWDVGSNSFSASFMSRNQDISFGAGSPTCEAQSPTFTCKSSFSSIFVEPVTPCPVSGGFSFLSTGGSTDLEFSSPIPSMPSFAFLSPSPVVEQRSRTLELSTTTSEVNAIAGEMDCKPVEAKRVGGSNGNRALGFHSKRNQTIGLGEREQLDFVVTESVIRWSSCTQLPTSPRSSLVC* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02806 496 Coils Coil 496 496 - -
Rops6g02806 496 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Rops6g02806 496 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02806 496 SUPERFAMILY Protein kinase-like (PK-like) 38 300 IPR011009 -
Rops6g02806 496 Gene3D Transferase(Phosphotransferase) domain 1 128 320 - -
Rops6g02806 496 FunFam Phosphoenolpyruvate carboxylase kinase 128 315 - -
Rops6g02806 496 CDD STKc_CAMK 40 298 - -
Rops6g02806 496 Pfam Protein kinase domain 43 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02806 496 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Rops6g02806 496 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02806 496 FunFam Calcium-dependent protein kinase 1 43 126 - -
Rops6g02806 496 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 311 - -
Rops6g02806 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02806 Rops-Chr6 50305098 50309118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02806 33 308 EF-hand Containing Proteins AT2G17290 51.087 1.06e-95 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Rops6g02806 Pkinase 3.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02806 - - gmx:100776088 790.03