Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02797 ATGACTAAGATCCTGGAGGCTCTCCAAGCTTTGGAAAAGAGAAACACATATGTGGTCACTTCAGCGGCAAACGAAGAACAATCAGCCACTCCTTCTCACCCTCCTGGGTTCACTCCGATGCATGTGCAACTTCAAGGCATTAATCCTCAAGGGGCAATGGTGCCTCTCACAATGTACTCAAACAGACCATCAAGTGCCACCCATCAAGAAGCACATGTACAATTCCCACCATATGGCCTCCTCCTGATTCTAAGTTGTGGTTTGCATAACTCACCAGAGAGGGAACAACTTCCTGCACATCAAGATTTTCATGGCGTTCCAACGAATCAGAGTCTAAACCCTAGTTTTCACCATTATAATCCATTCGTCTCGCTTGATTCCCTCCACCTCAGGTACCATCGATTCAGAGACCTTACTGCTTTTGTTGATACTTTACAAAACCAAATGGAAGAAAGAGACTCACTGAAACGAACTCATCCACGACCCTTGTTAAACATTCCATGCTATCGTTGCGCAAGAGGATGCAAGAACAACATTGAGCACCCGAGAGCTAAGCCTCTGAAGGATTTCAAAACGCAAGAGGAAGCACGGGGCCGAATCCTTTTAATAAGGTTGTTGACTTTGTTGACAAGTTACTTCGATATGATCACCAAGAACGTCCCACTGCAGAAGAAGCAATGGGTAAAGGAAGTATTGCATTTGTCTACTACACCATTGCCATCATTGGATGAAATTGTAATGCATAATACTCTAGAGAGTTGCCTCTTGTGCCTTCCTTACAAAAGCATGAGACTTCACCAATGCTTTGAATCGAATATTTCTTCCCTATTGTCCAACAAGACCAAATTCAGGAGGAGGGGAAACTTGTGCAGACACTATGATTGA 885 0.4395 MTKILEALQALEKRNTYVVTSAANEEQSATPSHPPGFTPMHVQLQGINPQGAMVPLTMYSNRPSSATHQEAHVQFPPYGLLLILSCGLHNSPEREQLPAHQDFHGVPTNQSLNPSFHHYNPFVSLDSLHLRYHRFRDLTAFVDTLQNQMEERDSLKRTHPRPLLNIPCYRCARGCKNNIEHPRAKPLKDFKTQEEARGRILLIRLLTLLTSYFDMITKNVPLQKKQWVKEVLHLSTTPLPSLDEIVMHNTLESCLLCLPYKSMRLHQCFESNISSLLSNKTKFRRRGNLCRHYD* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02797 294 PANTHER ZINC FINGER PROTEIN WIP2 152 192 IPR043584 GO:0003700|GO:0010468
Rops6g02797 294 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02797 Rops-Chr6 50188169 50194680 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02797 106 192 C2H2 Transcription Factor Family AT1G34790 37.500 1.12e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02797 - - cam:101491653 92.4337