Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02781 ATGGATGGGGATCATAGCGAGTTGGGTACTGTGCATGAAGGGAATGTTGATATTGGACCTGAGACATCGAATTGCTTGGACTTGAATGTGGAGCAGAACTGTTGCAGTCCAAACATTGTTCATGCTAATGGCTCACGATCTGGTATTCCATTGACAAATGTACTCTGCACCAATTCAGATTTGGGTATCGGTATGGTATTTGAGTCTGATGATCATGCATACAAATTCTATAACAAATATGCTAGACTGGTGGGGTTTAGTGTTAGAAAAGATTGGATAAATAGGAGTAAGTTACATGGGCAGGTGGTGTCTAGGAAGTTTACCTGCTCCAAAGAGGGACACCGCAGGAAAGACAAGAGAGATGTTAATGTGAAGAAACATCGGAAGGAAACAAGAACTGGCTGCTTGGCACATATGATCGTCACTCGTCAACCAGATGGTAAATACCAGGTCACCCATTTTGAAGCTCAACATAATCATGACAATATAAACCCCAGCAATGCTAACATGTTAAACTTGCTAAATGAATTCAGTGTTGCTCAAGCTGTGGAAGCTGACTCAAATAGTGTTTTGGGACCTAAATCAAAGTCAGTATTAAATATGATGAATAAAAAATTAGATGCCCGTGATTCTCTTGATCAACTTTTCATAAAGTATGACAATTACCTTCATTCTGAAAGGGAAAGAGATATGAGTGAAGGAGAAGCAGGACGTTTGCTAGGTTATTTCCAAAGGCAACACTTTGAAAATCCAACATTTTTTTATGCTATACAGCTTGATGTTGATGACAAAGTAAGCAATCTATTTTGGGCTGACGACAATATGGTGGTAGATTACGAACATTTTGGTGATGTCATTTGTTTGGATACAACTTGCAAATCAAACAGAGATCTTCGGCCATTTGTACAGTTTCTAGGTGGTAATCATCACAAACAAGTGTTAATCTTTGCTGCTGCTTTTTTGTATGACAATACCGTTGAATCATTTAATTGGCTATTTCAGACTTTCATTAATGCAATGTCTGGGAAAAAGCCAAAGGCCATTATCACAGAACAAGAAGCTGTGATCATTGAAGCAGTCAATACGGTTTTTCCTGAAATAAACCATTGTACATGTGTATGGCAGATGTATGAGAACACTTTGAAACATCTCAGCCATTTTGTTAAGGATGTTGAATCTTTTGCAAATGATCTACGGAGCAGTATTTATGATCCCAAGGATGAGGAGGAATTTACTCATGCTTGGGAAGATATGCTGGAGAAGTATAATCTCAAGCAAAATGAATGGTTGAGATGGATGTATAGAGAAAGAGAGAAATGGGCTGTTGTCTTTGGTCGAAATACATTTTTTATAGACATCAAAGGCTTTCATTTAGTAGATGAGCAACGTTATACAGAAATAGAAGCTAGTTATGAAATGAGCAGATGTTTGCCGAGGCTAATGGGTAATGTGGTTTTGTTGAAGCATGCAAGTGATGTTTATACTCCAAGGGCATTTGATGTATTTCAGCGAGGATATGAGAAGTCTTTAAATGTTCTTGTTAATCAACACAGTAGAAATGGATCGGTATTTGAGTATAAAGCAAATACATTTGGGCATAATAGACAATACAGTGTCACCTTCAATTCTTCTGATGATACAGTTGTCTGCAGTTGTATGAAGTTTGAAGATGTTGGATTTCTGTGTAGCCATGCACTAAAAGTTCTTGACAATAGAAACATAAAAGTAGTTCCATCTCGGTATATCTTGAAGAGATGGACAAAAGATGCAAGGTTGGGAAATTTCAGGGAGATTAAGCAATGTAAAATGCAAGATAACCCTAAGATGGTTGTAGCAAGCTGTTACAAAGATTTGTGTCACAGACTTGTCAAGTTATCAACAAGAGCCTCTGAATCTATGGAGGCTTATCAATTTGCTGCAAGGAAACTTGATGAAGTTATGGAAGGAGTGGAGAAAATCTTGACATTGAAAGTTGAGGAAGCTCAAGTTATCACCTCAAGTAGTATTGATGCAAATGTTTCAGAAAGTGAGCCTGCGGAGATCTTTCTGAATGGACATGCAACTGAGGATCAGGATGAAACTAACAGAGTTAATGGAGAAAAAGACAGGAGAACTGCACCAGATAGGGGCCATCAAACAACTGTGAATTGTAATCGAACTCATTCTAACAGGATTTTAAATGTAGAAGTATCTCCACCAAATACCACTGTCTGCATTTCAAGCCCCTCATCTGCATACGTTTCATCTCAATCTGTAACACCAAATACCATTTTGCAGGGTTTATACAGTTTTGAAGCCAACCAAGTGGTTCATTGCATGAATGAACAGCCTAATCTTGTGCTGGACCATCACTCTAGTACTAACATGTTCCAACCGCCAAACTTCTTTTCTAACCAACAGAATTCTCCTGACCAATCGCAACTATTGCAGGAGCCCATAATTCAGCACACATACCATGAGACCATGCCCAGCAATAATCAGATGCGACAGGGGATGAATCTTGACATCCAAAATCCACATTCATCTTCATTCTTACTGTATGACCATAGATACAGAAGTTCTGACTCTGCATAA 2574 0.3846 MDGDHSELGTVHEGNVDIGPETSNCLDLNVEQNCCSPNIVHANGSRSGIPLTNVLCTNSDLGIGMVFESDDHAYKFYNKYARLVGFSVRKDWINRSKLHGQVVSRKFTCSKEGHRRKDKRDVNVKKHRKETRTGCLAHMIVTRQPDGKYQVTHFEAQHNHDNINPSNANMLNLLNEFSVAQAVEADSNSVLGPKSKSVLNMMNKKLDARDSLDQLFIKYDNYLHSERERDMSEGEAGRLLGYFQRQHFENPTFFYAIQLDVDDKVSNLFWADDNMVVDYEHFGDVICLDTTCKSNRDLRPFVQFLGGNHHKQVLIFAAAFLYDNTVESFNWLFQTFINAMSGKKPKAIITEQEAVIIEAVNTVFPEINHCTCVWQMYENTLKHLSHFVKDVESFANDLRSSIYDPKDEEEFTHAWEDMLEKYNLKQNEWLRWMYREREKWAVVFGRNTFFIDIKGFHLVDEQRYTEIEASYEMSRCLPRLMGNVVLLKHASDVYTPRAFDVFQRGYEKSLNVLVNQHSRNGSVFEYKANTFGHNRQYSVTFNSSDDTVVCSCMKFEDVGFLCSHALKVLDNRNIKVVPSRYILKRWTKDARLGNFREIKQCKMQDNPKMVVASCYKDLCHRLVKLSTRASESMEAYQFAARKLDEVMEGVEKILTLKVEEAQVITSSSIDANVSESEPAEIFLNGHATEDQDETNRVNGEKDRRTAPDRGHQTTVNCNRTHSNRILNVEVSPPNTTVCISSPSSAYVSSQSVTPNTILQGLYSFEANQVVHCMNEQPNLVLDHHSSTNMFQPPNFFSNQQNSPDQSQLLQEPIIQHTYHETMPSNNQMRQGMNLDIQNPHSSSFLLYDHRYRSSDSA* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02781 857 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 63 652 IPR031052 GO:0006355
Rops6g02781 857 MobiDBLite consensus disorder prediction 686 709 - -
Rops6g02781 857 SMART 26again6 548 575 IPR006564 GO:0008270
Rops6g02781 857 Pfam FAR1 DNA-binding domain 75 161 IPR004330 -
Rops6g02781 857 MobiDBLite consensus disorder prediction 686 712 - -
Rops6g02781 857 Pfam MULE transposase domain 285 379 IPR018289 -
Rops6g02781 857 ProSiteProfiles Zinc finger SWIM-type profile. 537 573 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02781 Rops-Chr6 49954680 49958360 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops6g02781 MULE 8.3e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02781 - K17604 gmx:100809803 1379.77