Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02776 ATGGCTGTTCCCTTCAACGTTGTACTCTCGTACCTTGTCGTGTTCCTCCACCTATGGTGTGCCATTGCTGACCAAAGAGAACAAAACCCAGAAAAAATTTCACTCCTTTCCTTCAAAGACAGTCTCCAAAACCCTCATGTTTTAGCTTCATGGCACCCTTCAACCCCTCACTGTGACTGGGTTGGTGTTACTTGCCAACTCGGCCGAGTCAACTCGCTCTCTCTTCCTTCTCGTTACCTCAGAGGCAAACTCTCTTTGTCTCTCTCTTCTCTTTCCTCTCTCACAGTCCTCAACCTTGATGACAATCAGTTTTCTGGCGAAATTCCCGGCGAACTCGGTGAGTTGGTTCAGCTTGAAACTCTCAGACTCGGTTCCAACTCGTTCACCGGAAAAATCCCACCGGAGTTGGGGAACTTGAAAAAACTGCGTACACTTGACCTCTCCAGCAATGCCTTCGCCGGAGAAATACCGGGAAGCATCGGAAACATGACCGCGCTTCAGTTCCTGGACTTGAGTAACAACCTTCTATCAGGTTCTCTTCCTAAAACTGTCTTCACCGGAACAAGGTCTTTGATTTCCGTTGATATATCGAACAACTCGTTTTCCGGTGAACTGCCACCGGAAATTGGGAACTGGGAGAACCTCACAGCTCTTTACATTGGGATTAACAAGTTGTCAGGTACATTGCCTAAGGAAATTGGGGAGCTTTCAAAGCTTGAAATATTCTATTCACCTTCATGTTTAATCGAAGGTCCATTGCCTGAGGAAATGTCAAAGCTTAAGTCGTTGACGAAGCTTGACCTTTCTTACAACCCCTTGAAGTGTTCAATCCCAAAGTTTATTGGGAAGTTGGAGAAATTGAAAATTTTGGACCTTGTCTTTGCTCAGCTTCATGGGTCAGTGCCAGCTGAGCTTGGAAATTGTAGAAACTTAAGGTCTGTGATGCTTTCTTTCAATTCACTTTCTGGGTCATTACCTGAGGAGCTTTCTGAGCTTCCAATAATAACTTTTTCAGCTGAAAAGAATCAGCTTCATGGGCCTTTGCCTTCTTGGCTTGGGAAATGGACTAATGTTGATTCTCTCTTGCTTTCTGCTAACCGTTTTTCTGGGGTGATTCCACCTGAGCTTGGGAATTGCTCTCTGATGGGGCACCTAAGTTTGAGCAGCAACTTGTTGACAGGTCCCATACCTGAGGAGCTTTGTAGTGCGGCCTCACTTGTGGAGATTGATCTTGATGACAACTTCCTTTCTGGAACAATTGAGAAAGCATTTGTCAAGTGTAAAAACCTTACTCAGTTGGTTTTGATGAATAATCAGATTGTTGGTTCTATACCACAGTACCTTTCAGAGCTACCCTTGATGGTGCTGGACCTAGACTCCAACAATTTTAGTGGAAAAATACCTTCTAGTCTGTGGAATTCATCAACACTGATGGAATTCTCTGCTGCCAATAACCGTTTGGAGGGTTCTCTTCCTGTAGAGATTGGGAATGCGGTTATTCTAGAGAGGCTTGTTCTTAGCAATAATCGACTCACGGGTACTATACCTAAGGAAATTGGGAGTCTCACAAGTCTTTCAGTTCTTAATTTGAATGGAAATATGCTTGTAGGCAATATTCCAACTGAGCTTGGTGACTGTATTTCCCTTACTACATTGGACCTTGGAAACAATCAACTCAATGGGTCTATTCCTGAGAAACTGGTGGAACTAAGCGAATTACAGTGCCTGGTTCTTTCTCACAATAATCTGTCTGGGTCTATTCCTTCCAAGAAATCTTCATATTTTCGACAACTTACCATCCCTGATTTGAGCTTTGTTCAACACCTTGGTGTATTTGATCTTTCTCACAATAGGTTGTCTGGCACCATACCTGATGAACTGGGGAGCTGTGTAGTGGTTGTGGATCTATTACTTAGCAAAAACATGCTTTCTGGTAGCATTCCAAGATCACTCTCACGCTTGACAAATCTAACAACTTTGGATTTGTCAGGCAACTTGTTGTCAGGTTCCGTTCCACCAGAGCTTGGAGATGCCCTCAAACTCCAGGGTTTATATCTTGGACAGAATCAACTCTCAGGTACTATACCTGAAAGTTTTGGAAAATTGAGTAGTTTGGTGAAGCTGAATTTGACAGGAAATAAGTTGTCTGGTCCAATTCCAAATAGATTTGGGAACATGAAGGAGTTGACTCACTTGGACTTGAGCTCTAATGAGCTCAGTGGTGAGCTCCCATCCTCTCTTTCAGGTGTGCAAAGCCTTGTTGGGCTTTACGTGCAGAAGAACAGGCTTTCTGGCCAAGTAGGGGAGCTCTTCTCAAACTCCATGACATGGAGGATTGAGACAATGAATTTAAGTGATAATTGCTTCGATGGGAACTTGCCACGATCCTTGGGAAACCTTTCCTACTTGACAAATTTGGATCTTCATCGAAATATGTTGAGTGGAGAGATTCCTTTAGACCTTGGGAATCTAATGCAACTGGAGTATTTTGATGTTTCAGGTAATCAGTTATCTGGAAAGATTCCAGAGAAGTTATGCAGCATAGTTAATCTGAATTACTTAGATTTGTCTCAAAACAGATTGGAAGGGTCTATTCCCAGAAGTGGTATTTGCCAGAACCTATCCAGAGTTAGATTTGTGGGGAATAGAAATCTTTGTGGCCAGATGTTGGGTATAAATTGTCAGATCAAAAGCATTGGTAGATCTGCGTTGTTTAATGCATGGAGGCTTGCTGGAATTGCCATGACAATCATATTAATAACTATAAGCATTGCTTTTGTTCTACATAGATGGATTACCAGGAGGCAACATGATCCAGAGGAACTTGAGGAACGCAAACTAAACAGTTATGTGGATCAAAATCTTTATTTCTTGAGCAGTAGCAGATCAAAAGAACCTTTGAGTATCAATGTAGCAATGTTTGAACAGCCTCTTCTGAAGTTAACTTTGGTTGATATCCTTGAAGCCACTGACAACTTCAGCAAGGCAAATATAATTGGAGATGGAGGTTTTGGAACTGTTTACAAGGCCACTTTACCTAATGGAAAAACAGTTGCTGTGAAGAAGCTTAGTGAAGCTAAAACTCAGGGTCATCGCGAGTTCATGGCTGAAATGGAAACCTTGGGCAAGGTGAAGCATCAAAATCTCGTTGCATTGCTTGGATATTGCTCAATGGGAGAGGAGAAACTCCTTGTTTATGAATACATGGTAAATGGGAGCTTAGATCTTTGGTTGAGAAACAGGACTGGTGCCCTTGAAATCCTTGACTGGAACAAACGTTACAAAATTGCAACTGGTGCAGCTAGAGGATTAGCTTTCCTTCATCATGGTTTCATACCTCACATCATTCACAGGGATGTTAAAGCTAGCAACATTTTACTCAATGAAGATTTTGAGCCAAAAGTTGCAGACTTTGGACTTGCAAGACTCATCAGTGCCTGTGAGACTCATATCACCACTGATATTGCTGGAACATTTGGTTACATTCCACCAGAGTATGGGCAGAGTGGAAGGTCCACAACAAGAGGAGATGTCTACAGTTTTGGTGTGATTTTACTTGAACTTGTGACTGGAAAAGAGCCAACTGGACCAGATTTTAAAGAGATTGAAGGTGGGAACTTGGTTGGGTGGGTTAGTCAGAAGATCAAGAAAGGGCAAGCTGCTGATGTTCTTGATCCAACAGTTCTTGATGCAGATTCAAAGCAGATGATGCTTCAAATGCTGCAGATTGCTTATGTATGCCTCTCTGATAATCCTGCAAATAGGCCTACGATGCTTCAAGTACACAAATTCTTGAAGGGGATTAAAGGAGAGAGTAGTTAG 3822 0.4246 MAVPFNVVLSYLVVFLHLWCAIADQREQNPEKISLLSFKDSLQNPHVLASWHPSTPHCDWVGVTCQLGRVNSLSLPSRYLRGKLSLSLSSLSSLTVLNLDDNQFSGEIPGELGELVQLETLRLGSNSFTGKIPPELGNLKKLRTLDLSSNAFAGEIPGSIGNMTALQFLDLSNNLLSGSLPKTVFTGTRSLISVDISNNSFSGELPPEIGNWENLTALYIGINKLSGTLPKEIGELSKLEIFYSPSCLIEGPLPEEMSKLKSLTKLDLSYNPLKCSIPKFIGKLEKLKILDLVFAQLHGSVPAELGNCRNLRSVMLSFNSLSGSLPEELSELPIITFSAEKNQLHGPLPSWLGKWTNVDSLLLSANRFSGVIPPELGNCSLMGHLSLSSNLLTGPIPEELCSAASLVEIDLDDNFLSGTIEKAFVKCKNLTQLVLMNNQIVGSIPQYLSELPLMVLDLDSNNFSGKIPSSLWNSSTLMEFSAANNRLEGSLPVEIGNAVILERLVLSNNRLTGTIPKEIGSLTSLSVLNLNGNMLVGNIPTELGDCISLTTLDLGNNQLNGSIPEKLVELSELQCLVLSHNNLSGSIPSKKSSYFRQLTIPDLSFVQHLGVFDLSHNRLSGTIPDELGSCVVVVDLLLSKNMLSGSIPRSLSRLTNLTTLDLSGNLLSGSVPPELGDALKLQGLYLGQNQLSGTIPESFGKLSSLVKLNLTGNKLSGPIPNRFGNMKELTHLDLSSNELSGELPSSLSGVQSLVGLYVQKNRLSGQVGELFSNSMTWRIETMNLSDNCFDGNLPRSLGNLSYLTNLDLHRNMLSGEIPLDLGNLMQLEYFDVSGNQLSGKIPEKLCSIVNLNYLDLSQNRLEGSIPRSGICQNLSRVRFVGNRNLCGQMLGINCQIKSIGRSALFNAWRLAGIAMTIILITISIAFVLHRWITRRQHDPEELEERKLNSYVDQNLYFLSSSRSKEPLSINVAMFEQPLLKLTLVDILEATDNFSKANIIGDGGFGTVYKATLPNGKTVAVKKLSEAKTQGHREFMAEMETLGKVKHQNLVALLGYCSMGEEKLLVYEYMVNGSLDLWLRNRTGALEILDWNKRYKIATGAARGLAFLHHGFIPHIIHRDVKASNILLNEDFEPKVADFGLARLISACETHITTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWVSQKIKKGQAADVLDPTVLDADSKQMMLQMLQIAYVCLSDNPANRPTMLQVHKFLKGIKGESS* 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02776 1273 FunFam Leucine-rich repeat receptor protein kinase EMS1 336 595 - -
Rops6g02776 1273 SMART LRR_typ_2 606 630 IPR003591 -
Rops6g02776 1273 SMART LRR_typ_2 522 546 IPR003591 -
Rops6g02776 1273 SMART LRR_typ_2 654 678 IPR003591 -
Rops6g02776 1273 SMART LRR_typ_2 163 187 IPR003591 -
Rops6g02776 1273 SMART LRR_typ_2 848 873 IPR003591 -
Rops6g02776 1273 SMART LRR_typ_2 139 162 IPR003591 -
Rops6g02776 1273 SMART LRR_typ_2 308 332 IPR003591 -
Rops6g02776 1273 SMART LRR_typ_2 726 750 IPR003591 -
Rops6g02776 1273 SMART LRR_typ_2 702 725 IPR003591 -
Rops6g02776 1273 SMART LRR_typ_2 547 570 IPR003591 -
Rops6g02776 1273 SMART LRR_typ_2 260 284 IPR003591 -
Rops6g02776 1273 SMART LRR_typ_2 91 115 IPR003591 -
Rops6g02776 1273 FunFam serine/threonine-protein kinase BRI1-like 2 954 1068 - -
Rops6g02776 1273 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1115 1127 IPR008271 GO:0004672|GO:0006468
Rops6g02776 1273 PRINTS Leucine-rich repeat signature 166 179 - -
Rops6g02776 1273 PRINTS Leucine-rich repeat signature 654 667 - -
Rops6g02776 1273 SUPERFAMILY L domain-like 595 887 - -
Rops6g02776 1273 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 602 898 - -
Rops6g02776 1273 Gene3D Ribonuclease Inhibitor 28 185 IPR032675 -
Rops6g02776 1273 Pfam Leucine Rich Repeat 729 749 IPR001611 GO:0005515
Rops6g02776 1273 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 66 184 - -
Rops6g02776 1273 Gene3D Transferase(Phosphotransferase) domain 1 1069 1273 - -
Rops6g02776 1273 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Rops6g02776 1273 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Rops6g02776 1273 FunFam serine/threonine-protein kinase BRI1-like 2 1069 1273 - -
Rops6g02776 1273 FunFam leucine-rich repeat receptor protein kinase EMS1 186 335 - -
Rops6g02776 1273 SMART LRR_sd22_2 654 669 - -
Rops6g02776 1273 SMART LRR_sd22_2 726 752 - -
Rops6g02776 1273 SMART LRR_sd22_2 260 285 - -
Rops6g02776 1273 SMART LRR_sd22_2 824 850 - -
Rops6g02776 1273 SMART LRR_sd22_2 546 572 - -
Rops6g02776 1273 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 28 181 - -
Rops6g02776 1273 SUPERFAMILY Protein kinase-like (PK-like) 974 1265 IPR011009 -
Rops6g02776 1273 SUPERFAMILY L domain-like 340 605 - -
Rops6g02776 1273 Pfam Protein tyrosine and serine/threonine kinase 996 1265 IPR001245 GO:0004672|GO:0006468
Rops6g02776 1273 SMART serkin_6 993 1265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02776 1273 ProSitePatterns Protein kinases ATP-binding region signature. 999 1022 IPR017441 GO:0005524
Rops6g02776 1273 ProSiteProfiles Protein kinase domain profile. 993 1265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02776 1273 Gene3D Phosphorylase Kinase; domain 1 955 1068 - -
Rops6g02776 1273 Gene3D Ribonuclease Inhibitor 186 336 IPR032675 -
Rops6g02776 1273 Gene3D Ribonuclease Inhibitor 337 595 IPR032675 -
Rops6g02776 1273 Gene3D Ribonuclease Inhibitor 596 897 IPR032675 -
Rops6g02776 1273 SUPERFAMILY RNI-like 72 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02776 Rops-Chr6 49837394 49841215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02776 31 1268 Receptor kinase-like Gene Family AT5G07280 61.495 0.0 1461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Rops6g02776 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02776 - - gmx:100780446 2144.78