Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02763 ATGTTTCGTCATGCATTTACTCCATGTGAGAACAATAAGCTCCACCAACCCTTTGGTATTCATCAACAATCCAAGCGTCAAGGATTCCCTCATCTGAATCGTGCTCATCACCGCCACCGCAAAGGTTCCCAAAATCTTCCCCACACAAGCCGTGGATATAACAAGCAAAAGAAGCCCCCATTCCACCACACCCTGCAACTTAGTCACATCAGTTTTCAACCCAAATGTGAAGGAGAAACAGTACTGCAAGAGCTTCAGAGTTTAGAGCAACAGCTTGACACATCTCTAAAGCGCATCCGAACAAGAAAGAACCAAGTTATGAATCAATCCATCTCGGAGATGCATAAAAAGTGA 354 0.4435 MFRHAFTPCENNKLHQPFGIHQQSKRQGFPHLNRAHHRHRKGSQNLPHTSRGYNKQKKPPFHHTLQLSHISFQPKCEGETVLQELQSLEQQLDTSLKRIRTRKNQVMNQSISEMHKK* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02763 117 Coils Coil 85 105 - -
Rops6g02763 117 MobiDBLite consensus disorder prediction 30 45 - -
Rops6g02763 117 ProSiteProfiles K-box domain profile. 46 117 IPR002487 GO:0003700|GO:0005634|GO:0006355
Rops6g02763 117 MobiDBLite consensus disorder prediction 1 59 - -
Rops6g02763 117 Pfam K-box region 80 117 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02763 Rops-Chr6 49615102 49615455 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02763 83 117 MADS-box Gene Family AT1G69120 71.429 9.84e-10 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02763 K09264 - gmx:100786580 58.9214