Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02756 ATGGCGTTGGGTGTACCTGCGGTTCCGTTCACGTTTGTCGTGCACTTTCTGGGTGTTGCCGCCATCGTCTTGGTCTTGGTCTGGAACTTGCATTTCAGAGGAGGCTTGGCTTGGGATTCTGATAACAAGGCCCTCATCTTCAATCTTCATCCTGTTCTTATGCTTATGGGCTTCATAGTTATGGGAGGTGAAGCTATTATAAGTTACAAATCTCTTCCCTTGAAGAAGGAGGTGAAGAAATTGATACACCTTGTTCTCCACGCCATTGCATTAGCACTTGGAATAGTTGGAATTTGTGCTGCGTTCAAGAATCATAATGAAAGTGGGATTGCCAATCTGTACAGCTTGCATTCATGGCTTGGAATTGGGGTTATTTCCCTTTATGGCATTCAGTGGATATTTGGGTTTGTGATGTTTTTCTTCCCTGGTGGAACTCCAGCCATTAGACGTGAATCACTTCCTTGGCATGTCCTATTTGGGCTGTTTATATATGTCTTGGCTATTGGCACTGCTTCTCTTGGGTTTCTGGAGAAGCTTACATTCTTGGAGAGCTCAGGAGTGGCGAAATATGGTTCTGAGGCTTTACTTGTTAACTTCACTGCTGTGATCACAATCTTGTTTGGTGCCTTTGTTGTATTATCTGCTATATCTGAAGCTCCTGCAGCAGTAACAGATGACTACTCAGCCATATAG 693 0.4401 MALGVPAVPFTFVVHFLGVAAIVLVLVWNLHFRGGLAWDSDNKALIFNLHPVLMLMGFIVMGGEAIISYKSLPLKKEVKKLIHLVLHAIALALGIVGICAAFKNHNESGIANLYSLHSWLGIGVISLYGIQWIFGFVMFFFPGGTPAIRRESLPWHVLFGLFIYVLAIGTASLGFLEKLTFLESSGVAKYGSEALLVNFTAVITILFGAFVVLSAISEAPAAVTDDYSAI* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02756 230 SMART 561_7 49 175 IPR006593 -
Rops6g02756 230 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
Rops6g02756 230 PANTHER CYTOCHROME B561-RELATED 1 217 IPR043205 GO:0016491
Rops6g02756 230 CDD Cyt_b561_ACYB-1_like 40 183 - -
Rops6g02756 230 FunFam Cytochrome b reductase 1 5 224 - -
Rops6g02756 230 Gene3D - 3 223 - -
Rops6g02756 230 ProSiteProfiles Cytochrome b561 domain profile. 13 216 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02756 Rops-Chr6 49542083 49544782 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02756 1 218 Chloroplast and Mitochondria Gene Families AT4G25570 70.642 1.86e-112 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02756 K08360 - gmx:100306179 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02756 6 49542083 49544782 Rops6g02756 6 49542083 49544782 ECH