Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02747 ATGATTATGGGGGGTTTGGTGGAGATGTTGGAGGAAACATGGCATCATAGATATAATCGAAACCATAATCAGTGTCAGCAAAATGGTGACTCAAATGAGTGGTTGCCATTGCAGAGTGATGAATGTTTGGCTCTAATGGTGGAAAAGGAATGCCACCACTTGCCTGGTGGTGATTATGTGAATAGGCTGAGGAGAGGGGATTTGGATTTTGGGGCAAGAAATGAGGCCATTGATTGGATTGAAAAGGTCCGAGAGCATTTTGGTTTTGGACCTCTTTGTGCATATTTATCTATAAACTACTTGGACCGCTTCCTATCTGCATATGAATTACTGAAGCAAAGAGCTTGGTCAATGCAATTGTTGGCTGTGGCATGCTTGTCTCTGGCAGCCAAAATAGAAGAGACTGAAGTTCCTCTGATTCTTGATTTGCAGTGCGATTTGAAAGATCCATCTCCCTCTCTCCTTATTCACCCAATTATGATGGATAAGAGTTGGATTGACAAACCAATTAGATCAAATGAGTTCTTATATGGGGTAGTCCAATTTTTGGATTTTGCCTTTTCAAATTCAGCTATCAATGGACAGATTTTGTGTCCTTGTATCACAAGTGGATTTCGTTATATGGGCAATAGAACTGAAGTGTTTAGTCATCTCCTTCAAAAGGGCTTTCCAAGGAAATACACAGGTACATGCACGGGGAAAAGCTTGTTCAATCTAATGTTGAATTGGTAG 732 0.4071 MIMGGLVEMLEETWHHRYNRNHNQCQQNGDSNEWLPLQSDECLALMVEKECHHLPGGDYVNRLRRGDLDFGARNEAIDWIEKVREHFGFGPLCAYLSINYLDRFLSAYELLKQRAWSMQLLAVACLSLAAKIEETEVPLILDLQCDLKDPSPSLLIHPIMMDKSWIDKPIRSNEFLYGVVQFLDFAFSNSAINGQILCPCITSGFRYMGNRTEVFSHLLQKGFPRKYTGTCTGKSLFNLMLNW* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02747 243 Gene3D - 45 55 - -
Rops6g02747 243 SMART cyclin_7 78 164 IPR013763 -
Rops6g02747 243 Pfam Cyclin, N-terminal domain 43 145 IPR006671 -
Rops6g02747 243 Gene3D - 56 149 - -
Rops6g02747 243 SUPERFAMILY Cyclin-like 34 146 IPR036915 -
Rops6g02747 243 Pfam Transposase-associated domain 163 228 IPR029480 -
Rops6g02747 243 ProSitePatterns Cyclins signature. 73 104 IPR006671 -
Rops6g02747 243 PANTHER CYCLINS 40 144 IPR039361 -
Rops6g02747 243 CDD CYCLIN_AtCycD-like_rpt1 72 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02747 Rops-Chr6 49404177 49407709 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02747 35 145 Core Cell Cycle Gene Families AT5G10440 57.658 3.14e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02747 K18810 - gmx:100803873 213.386