Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02726 ATGAACGTCGTCGTGGCTTTCGCATTCTTCTATCTAACCACGGTGGTGCCATGGTGTGTTTGTTCGGAAAGGCTTTTGGTGAACATGACGCTGGTTCGGAATGCACGTGCCACCGGTGCTTTTTGTTTGGATGGGAGTTTACCAGCGTATCATTTGCACAGAGGATTTGGAGCTGGAGAAAACAACTGGCTACTACAATTTGAGGGTGGTGGGTGGTGCAATGACTTGACATCGTGCCTGGAAAGAGCCCAAAGTCGCAGGGGTTCAACACGTTATATGACCCAATGGGAGGTCTTCTCTGGTATTTTAAGCAACAACGCCACCCTTAATCCAGACTTTTACAATTGGAACCGCGTGAAGCTTAGATATTGTGATGGAGCTTCATTTACTGGAGACAGAGTGTTCAATAATGGGACAACAAAGCTTTACTTCAAAGGGCAAAAGATTTGGGAAGCCATTATTCACGACCTTCTACCAAAAGGTTTGGGAAACGCACACAAGGCTTTGCTCTCAGGCTGTTCAGCAGGAGGTTTAGCGACCTTTCACCACTGTGACAACTTCACCAAGTATTTGCCTATGAATACTAGTGTTAAATGCTTGAGTGATGCAGGTTTTTTTCTTGACGAAAGAGATGTAAGTTTGAACCATACTATGAGGTTCTTCGTCAAAAGTCTAGTTTCATTTCAGGGGATAGAGCAGAACCTGAATAGAAACTGCACCAGTGCACTTTTCTTTCCAGACTTGTGCTTCTTTCCACAATATGCGTTGAGATACATATCAACACCATATTTTATCTTGAACTCTGCCTATGATGTATACCAATTCCATCATATATTGGTGCCACCTTCTGCTGATATGCGTGGACACTGGAACCACTGTAAGCTGAACCCAGCAGCATGCACACCAGACCAAATTAATACATTGCAAGGTTTTAGGCTCCACATGCTTGCAGCTTTGAGACCGTTCACTATATATTCAAGAAGAGGGGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAATTGCAAGAAACATGGTTTGGAGCTGATTCTCCAACAATAAACAACAAGACTATTGCAGAAGCGGTTGGTGATTGGTATTTTAGTAGAAACAGAACAAAGGAAATAGACTGTGCATATCCATGTGATACAACTTGTCATAATCTTATACCATAA 1182 0.4255 MNVVVAFAFFYLTTVVPWCVCSERLLVNMTLVRNARATGAFCLDGSLPAYHLHRGFGAGENNWLLQFEGGGWCNDLTSCLERAQSRRGSTRYMTQWEVFSGILSNNATLNPDFYNWNRVKLRYCDGASFTGDRVFNNGTTKLYFKGQKIWEAIIHDLLPKGLGNAHKALLSGCSAGGLATFHHCDNFTKYLPMNTSVKCLSDAGFFLDERDVSLNHTMRFFVKSLVSFQGIEQNLNRNCTSALFFPDLCFFPQYALRYISTPYFILNSAYDVYQFHHILVPPSADMRGHWNHCKLNPAACTPDQINTLQGFRLHMLAALRPFTIYSRRGGMFINSCFAHCQSELQETWFGADSPTINNKTIAEAVGDWYFSRNRTKEIDCAYPCDTTCHNLIP* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02726 393 Pfam Pectinacetylesterase 21 373 IPR004963 GO:0016787
Rops6g02726 393 PANTHER NOTUM-RELATED 18 390 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02726 Rops-Chr6 48976086 48987437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02726 1 393 Carbohydrate Esterase AT5G23870 67.929 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02726 K19882 - gmx:100802358 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02726 6 48976086 48987437 Rops6g02726 6 48976086 48987437 ECH