Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02713 ATGCGTTCGTGGTGGGGAAAATCATCATCAAAAGAAACCAAGAAGAAAGCAAGTAAGGAAAGTTTTATCGACACATTGCACCGAAAATTTAAAATTCCATCTGAAGCCAAACTAAGCATTATACCTGGAGGATCTCGTAGACATCCCAATGACACAATTTCAGAGAAGGGGGATCGTTCTCCATCTGACTCAAGATCTCCTTCACCTTCCAAAGTGGCAAGGTGTCAAAGTTTTGCTGAAAGGCCTCATGCTCAGCCACTTCCACTTCCTGGTCTGCACCCTTCAAGTGCAGGCCGAGTAGATTCCGAAATTAGCATATCATCAAAATCAAGAATGGAAAAGGGCTCCAAGCCATCATTGTTTCTTCCACTTCCAACACCTGGATGCATTCGTTGCGGGCCAAACCCTGCAGATTTGGATGGAGATATGGTCACTGCTTCAGTCTTTAGTGATTGCTCTGCTGATAGTGATGAGCCGGCTGACTCACACAATCGCAGTCCTCTGGCAACTGATTCTGAGACTGGGACTAGAACTGCTGCTGGCAGTCCTTCCAGCATGATGCTCAAGGATCAATCATCTGCTGTTTCCCAACTGAATTCAAGAGAAGTAAAAAAACCGGCAAACATTCTAAGTAATCAGGTGTCTTCTTCTACTTCACCAAAACGGAGGCCTTTACGCAACCATGTTCCAAATCTTCAGGTTCCTCCTCATGGTGCCTTCTATAGTGCTCCTGATAGTTCCTTGTCAAGTCCCTCAAGAAGTCCATTGAGGGCATTTGGCACAGATCAGGTGTTAAACTCTGCTTTTTGGGCTGGAAAACCATATCCAGAGGTCAATTTAGTTGGATCTGGGCACTGCTCTAGTCCAGGTTCGGGTCACAATTCCGGTCATAATTCGATGGGAGGGGACATGTCAGGACCGTTATTTTGGCAACCAAGCAGGGGTAGCCCTGAGTATTCTCCAGTACCTAGTCCTAGAATGACTAGCCCTGGTCCAAGCTCTAGAATTCAGAGTGGAGCAGTCACACCTATTCATCCTAGAGCCGGGGGAACGCCCACCGAGTCGCAGACGGGATGGATTGATGATGGAAAACAACAGAGTCATCGTTTGCCCCTTCCTCCTTTAACAGTTACCAATTCCTCACCGTTCTCTCATTCTAATTCTGCAGCAACATCTCCATCTTTGCCAAGAAGTCCAGCTAGAGCAGATAATCCAATGAGCTCTGGATCACGTTGGAAAAAAGGAAAGCTGCTTGGCAGAGGAACATTTGGACACGTCTATCTTGGCTTCAATAGTGAAAGTGGTGAAATGTGTGCAATGAAGGAGGTTACTCTGTTTTCTGATGATGCCAAGTCTATGGAAAGTGCTAAGCAATTAATGCAGGAAATTCATTTATTAAGCCGTTTACGGCATCCGAATATTGTGCAGTATTATGGTACTGAAACAGTAGATGACAAGCTTTACATATACCTTGAGTATGTATCTGGAGGCTCCATACATAAACTTCTTCAAGAATACGGGCAATTTGGTGAACTGGCTATTCGTAGTTATACTCAACAAATTTTGTCAGGGCTTGCTTATTTACATGCTAAAAATACTCTCCACAGGGACATCAAAGGAGCAAATATACTGGTAGATCCAAATGGTCGGGTCAAGTTGGTAGACTTTGGCATGGCAAAACATATAACAGGGCAATCATGTCCATTGTCATTCAAAGGAAGCCCTTATTGGATGGCTCCTGAGGTTATAAAGAACTCTAATGGATGCAGCCTTGCTGTGGATGTGTGGAGTCTCGGATGCACAGTTTTGGAAATGGCTACAACTAAGCCTCCTTGGTTTCAGTATGAAGGGGTTGCTGCAATGTTCAAGATTGGCAATAGCAAGGAACTCCCGACAATCCCAGATCATCTCTCAAATGAAGGAAAGGATTTTGTTAGAAAATGTCTACAACGGGATCCACATGATCGTCCTTCAGCAAGTGAATTATTGGAACACCCTTTTGTAAAATGTGCTGCACCTGTGGAAAGACCTATTCTGGTTCCTGAAGCTTCAGACCCTGTTTCTGGGATTACACATGGAACAAAAACTCTGGGCATTGGACAAGGAAGAAGTCTGTCTGCCTTGGATTCAGATAAACTCTCTGTTCATTCTTCTAGGGTTATGAAAAGCAATCCTCATGAAAGTGAAATCCATCTTCCAAGGAATATATCTTGCCCTGTCTCTCCCATTGGAAGCCCACTTTTGAGGTCAAGATCACCACAGCACAGGAATGGAAGAATGTCTCCTTCTCCAATATCTAGCCCTCGAACTGCTTCTGGTCCATCCACGCCTCTCACTGGTGGCAGTGGTGCCATTCCATTTAGTAATCACTTAAAACAGTCAGTTTACTTTCAAGAGGGTCTTGGAAGCATGCCAAAGTCCCCAAATGGTGTCTACACTGCTCATCATGACTCAAATGTTGACATGTTTCGAGGAATGCAAATGGGGTCTCACATTACGTCAGAACTTCTTTCCAGTGAAAATGATGTTCTTGGTAAGCAGTTTTCAAGGTCTCCTCATGCAGAGCCATATGATTTTCAGTCTGTCTTGGCTGATCGTGTTGGTCGGCAGCTGCTGGGGGACCATGTTAAGATTAACCCATCCTTTGATCTAAGTCCCAGCTCATCTTTGCTCAACCGGGCAAATGGTTTATGA 2694 0.4462 MRSWWGKSSSKETKKKASKESFIDTLHRKFKIPSEAKLSIIPGGSRRHPNDTISEKGDRSPSDSRSPSPSKVARCQSFAERPHAQPLPLPGLHPSSAGRVDSEISISSKSRMEKGSKPSLFLPLPTPGCIRCGPNPADLDGDMVTASVFSDCSADSDEPADSHNRSPLATDSETGTRTAAGSPSSMMLKDQSSAVSQLNSREVKKPANILSNQVSSSTSPKRRPLRNHVPNLQVPPHGAFYSAPDSSLSSPSRSPLRAFGTDQVLNSAFWAGKPYPEVNLVGSGHCSSPGSGHNSGHNSMGGDMSGPLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAGGTPTESQTGWIDDGKQQSHRLPLPPLTVTNSSPFSHSNSAATSPSLPRSPARADNPMSSGSRWKKGKLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSMESAKQLMQEIHLLSRLRHPNIVQYYGTETVDDKLYIYLEYVSGGSIHKLLQEYGQFGELAIRSYTQQILSGLAYLHAKNTLHRDIKGANILVDPNGRVKLVDFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCSLAVDVWSLGCTVLEMATTKPPWFQYEGVAAMFKIGNSKELPTIPDHLSNEGKDFVRKCLQRDPHDRPSASELLEHPFVKCAAPVERPILVPEASDPVSGITHGTKTLGIGQGRSLSALDSDKLSVHSSRVMKSNPHESEIHLPRNISCPVSPIGSPLLRSRSPQHRNGRMSPSPISSPRTASGPSTPLTGGSGAIPFSNHLKQSVYFQEGLGSMPKSPNGVYTAHHDSNVDMFRGMQMGSHITSELLSSENDVLGKQFSRSPHAEPYDFQSVLADRVGRQLLGDHVKINPSFDLSPSSSLLNRANGL* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02713 897 MobiDBLite consensus disorder prediction 716 785 - -
Rops6g02713 897 MobiDBLite consensus disorder prediction 165 224 - -
Rops6g02713 897 MobiDBLite consensus disorder prediction 34 128 - -
Rops6g02713 897 MobiDBLite consensus disorder prediction 689 703 - -
Rops6g02713 897 SUPERFAMILY Protein kinase-like (PK-like) 410 746 IPR011009 -
Rops6g02713 897 CDD STKc_MEKK1_plant 411 668 - -
Rops6g02713 897 MobiDBLite consensus disorder prediction 7 22 - -
Rops6g02713 897 FunFam Mitogen-activated protein kinase kinase kinase 410 692 - -
Rops6g02713 897 MobiDBLite consensus disorder prediction 286 414 - -
Rops6g02713 897 MobiDBLite consensus disorder prediction 286 301 - -
Rops6g02713 897 ProSiteProfiles Protein kinase domain profile. 412 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02713 897 MobiDBLite consensus disorder prediction 150 254 - -
Rops6g02713 897 SMART serkin_6 412 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02713 897 ProSitePatterns Protein kinases ATP-binding region signature. 418 441 IPR017441 GO:0005524
Rops6g02713 897 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 60 678 - -
Rops6g02713 897 MobiDBLite consensus disorder prediction 371 405 - -
Rops6g02713 897 MobiDBLite consensus disorder prediction 683 703 - -
Rops6g02713 897 MobiDBLite consensus disorder prediction 1 22 - -
Rops6g02713 897 Gene3D Transferase(Phosphotransferase) domain 1 409 684 - -
Rops6g02713 897 MobiDBLite consensus disorder prediction 349 363 - -
Rops6g02713 897 Pfam Protein kinase domain 413 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02713 897 MobiDBLite consensus disorder prediction 747 785 - -
Rops6g02713 897 MobiDBLite consensus disorder prediction 100 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02713 Rops-Chr6 48801821 48810120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02713 4 886 MAP Kinase Kinase Kinase AT1G63700 57.761 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Rops6g02713 Pkinase 9.9e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02713 K20717 - gmx:100797994 1501.49