Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02709 ATGGCAGCAGAGGTGGTGAAGAGTGAAGAGTGTTTGGATGTTAAAATCACGGGTAAAAGCCATGTGAAGCCTGAAAAGAAAATTGGGAAGAAGGAGTGTCAACTGATCACTTTTGATCTTCCTTACCTAGCTTTCTACTATAACCAAAAGCTACTTTTTTACAAAGGGGGTGATTATGAGGGAATGGTGAAGAAACTGAAAGATGGGCTTAGTGTGGTGTTGGAAGATTTCCATCAATTAGCTGGTAAGATAGGGAAAGATGAGGAGGGTGTGTTCAGAGTGGAATATGATGATAACATGGCTGGTGTGGAGGTCACAGAAGCAGTTGCTGATGAGATTGAGGTAGCAGATCTGACTGTGGCAGAGAGCAACAACATTTTGAAGGAGTTGGTACCGTACAGTGGGATCTTGAACTTGGAAGGGATGCACAGACCCTTGTTGGCAGTTCAGTTAACCAAACTCAAAGATGGACTCGCGATGGGGTGCGCGTTCAACCACGCTGTCCTTGATGGAACCTCCACGTGGCACTTTATGAGCTCATGGGCTGAAATATGTCGTGGTGCTCCCTCCACGTCAACCCCACTCTTCTTTGAACGGACCAAGGCCCGAAACACGCGCGTGAAGCTTAACCTCACTCTTCCATCAGGCCCACCAGCAACATCTAACGGGGATGCAAAGCCCAAGCCCAGCCCACCACTGAGACAAAAGATCTTCACATTCTCCGACTCAACCATCAAGAAAATCAAATCAACGGTTAACGAAAACCCTCCATCTGACGGCTCAAAACCATTCTCAACATTCCAAGCTCTCTCAGTTCATATTTGGCGCCACGTAAGCCATGCACGTAACCTTAAACCCGAAGACCACACCGTGTTCACTGTCTTTGCAGATTGTCGGAAACGGGTTGACCCGCCAATGCCGGAGGGTTACTTCGGAAACCTAATCCAAGCCATATTTACCGTCACGGAAACGGGGTTATTGTTTTCAAACCCACCACAGTTTGGTGCTTCGTTGATCCAAAAAGCTATTGAAGCACACAATGCAAGAGCTATTAATGAACGTAACAAAGTGTGGGAAAGTGCACCAAAAGTGTTTGAATTCAAAGATGCTGGGGTGAACTCTGTGGTGGTGGGTAGCTCACCAAGGTTTAAGGTTTATGATGTGGATTTTGGATGGGGGAAACCAGAAAATGTTAGGAGTGGATCTAATAACCACTTTGATGGGATGATTTATTTGTATCAAGGCAAAAGTGGAGGGAGTAGCATTGATGTGGAGCTAACCTTGGAAGCTGAAGCTATGGGGAGATTGGAGCAAGATAAGGAATTTCTTATGGAGTATTAA 1341 0.4586 MAAEVVKSEECLDVKITGKSHVKPEKKIGKKECQLITFDLPYLAFYYNQKLLFYKGGDYEGMVKKLKDGLSVVLEDFHQLAGKIGKDEEGVFRVEYDDNMAGVEVTEAVADEIEVADLTVAESNNILKELVPYSGILNLEGMHRPLLAVQLTKLKDGLAMGCAFNHAVLDGTSTWHFMSSWAEICRGAPSTSTPLFFERTKARNTRVKLNLTLPSGPPATSNGDAKPKPSPPLRQKIFTFSDSTIKKIKSTVNENPPSDGSKPFSTFQALSVHIWRHVSHARNLKPEDHTVFTVFADCRKRVDPPMPEGYFGNLIQAIFTVTETGLLFSNPPQFGASLIQKAIEAHNARAINERNKVWESAPKVFEFKDAGVNSVVVGSSPRFKVYDVDFGWGKPENVRSGSNNHFDGMIYLYQGKSGGSSIDVELTLEAEAMGRLEQDKEFLMEY* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02709 446 MobiDBLite consensus disorder prediction 210 233 - -
Rops6g02709 446 Gene3D - 11 211 IPR023213 -
Rops6g02709 446 Pfam Transferase family 13 442 - -
Rops6g02709 446 FunFam Tryptamine hydroxycinnamoyl transferase 219 440 - -
Rops6g02709 446 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 16 443 - -
Rops6g02709 446 Gene3D - 218 439 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02709 Rops-Chr6 48755555 48757764 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02709 66 445 Monolignol Biosynthesis Gene Families AT5G48930 27.027 2.96e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02709 K19747 - gmx:100818158 728.783