Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02708 ATGGCAGCAGAGGAGGTGAAGAATGAAGAATGTTTGGATGTTAAAATCACGGGTAAAAGCCATGTGAAGCCTGAAAAGAAAATTGGGAAGAAGGAGTGTCAACTGATCACATTTGATCTTCCTTACCTAGCTTTCTACTATAACCAAAAGCTACTTTTTTACAAAGGGGGTGATTATGAGGGAATGGTGAAGAAACTGAAAGATGGGCTTAGTGTGGTGTTGGAAGATTTCCATCAACTAGCTGGTAAGATAGGGAAAGATGAGGAGGGTGTGTTCATAGTGGAATATGATGATTACATGGCTGGTGTGGAGGTCACAGAAGCAGTTGCTGATGAGATTGAGGTAGCAGATCTGACTGTGGCAGAGAGCAACAACATTTTGAAGGAGTTGGTACCATACAGTGGGATCTTGAACTTGGAAGGAATGCACAGACCCTTGTTGGCAGTTCAGTTAACCAAGCTCAAAGACGGACTCGCGATGGGGTGCGCGTTCAACCACGCGATCCTTGATGGAACCTCAACGTGGCACTTTATGAGCTCATGGGCTGAAATATGTCGTGGTGTTCCCTCCACGTCAGCCCCACCCTTCCTTGAACGAACCATGGCCCGAAACACGCGCGTGAAGTTTAACCTCACTCTTCCATCAGGCCCACCAGTAACATCTAACAGGGATGCAAAGCCCAAGCCCAGCCCACCACTAAGACAAAAGATCTTCACATTCTCTGACACAACCATCAAGAAAATCAAGTCAACACTCAACAAAAACCCTCCATCTAACGGCTCAAAACCATTCTCAACATTCCAAGCTCTTTCAGCTCATATTTGGCGCCACGTAAGCCATGCACGTAACCTTAAACCCGAAGACCACACCGTGTTCACTGTATTTGCTGATTGTCGGAAACGGGTTGACCCGCCAATGCCGAAGGGTTACTTCGGAAACCTAATCCAAGCCATATTTACCGTCACGAAAACGGGGTTATTGTTTTCAAACCCACCACAATTTGGTGCTTCGTTGATCCAAAAAGGTATTGAAGCACACAATGCAAGAGCTATTAATGAACGTAACAAAGTGTGGGAAAGTGCACCAAAGGTGTTTGAATTCAAAGATGCTGGGGTGAACTCTGTGGTGGTGGGTAGCTCACCGAGGTTTAAGGTTTATGATGTGGATTTTGGATGGGGGAAACCAGAAAATGTTAGGAGTGGTGGTTCTAATAACCACTTTGATGGGATGATTTATTTGTATCAAGGCAAAAGTGGAGGGAGTAGCATTGATGTGGAGCTAACCTTGGAAGTCGAAGCTATGGGGAGATTGGAGCAAGATAAGGAATTTCTTATGGAGTATTAA 1344 0.4516 MAAEEVKNEECLDVKITGKSHVKPEKKIGKKECQLITFDLPYLAFYYNQKLLFYKGGDYEGMVKKLKDGLSVVLEDFHQLAGKIGKDEEGVFIVEYDDYMAGVEVTEAVADEIEVADLTVAESNNILKELVPYSGILNLEGMHRPLLAVQLTKLKDGLAMGCAFNHAILDGTSTWHFMSSWAEICRGVPSTSAPPFLERTMARNTRVKFNLTLPSGPPVTSNRDAKPKPSPPLRQKIFTFSDTTIKKIKSTLNKNPPSNGSKPFSTFQALSAHIWRHVSHARNLKPEDHTVFTVFADCRKRVDPPMPKGYFGNLIQAIFTVTKTGLLFSNPPQFGASLIQKGIEAHNARAINERNKVWESAPKVFEFKDAGVNSVVVGSSPRFKVYDVDFGWGKPENVRSGGSNNHFDGMIYLYQGKSGGSSIDVELTLEVEAMGRLEQDKEFLMEY* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02708 447 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 16 444 - -
Rops6g02708 447 FunFam Tryptamine hydroxycinnamoyl transferase 220 441 - -
Rops6g02708 447 MobiDBLite consensus disorder prediction 211 233 - -
Rops6g02708 447 Gene3D - 218 440 IPR023213 -
Rops6g02708 447 Gene3D - 11 212 IPR023213 -
Rops6g02708 447 Pfam Transferase family 13 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02708 Rops-Chr6 48741866 48745702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02708 66 446 Monolignol Biosynthesis Gene Families AT5G48930 27.901 4.24e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02708 K19747 - gmx:100818158 707.597