Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02693 ATGAGGCCTCAAAAGCATTCAATTTTCTTCTTATCATCACTCATTCTTCTTTATCTGTTTCAAACACCGGCTTTTGCTACAAAAAAGTCATACATTGTGTACCTGGGATCACATGAGCATGGTCCAGGAGTTACAGAAGCTGATTTTGATCGAGTTACACAAAGTCATCATGAATTACTTGGATCCTATTTGGGAAGTGCTGAGAAAGCAAACGAAGCAATGTTTTATTCATACACAAAGCACATCAATGGCTTTGCAGCTATCCTTGAAGAGGAAGAAGCTGCTAACCTTGAAAATCATCCAGACGTTGTTTCAGTATTCTTAAACCAAGGAAGAAAACTACAAACTACATATTCGTGGGAATTCATGTCTCAGGAATATAATGGTGTAACTCGTCCCTTTTCCCTGTTTGAAAAGGCCAGATATGGTGAAGATACTATTATAGGAAGTCTTGATACTGGTGTATGGCCAGAACATCCTAGCTTTAGTGATGAGGGGATGAGACCCATTCCTTCAAGGTGGAAAGGAACTTGTCAGAGTGGTTCCACTGGCTTCCCTTGTAACAGGAAGGTAATTGGAGCAAGGTACTTCAACAAAGGGTATGCTTCCTGGGTTACTCCAGAGCATATGGAAAATAGTTCATTGAACACAGCAAGAGACTATGTGGGACATGGTTCTCACACACTATCAACATTAGGAGGGAACTTTGTTCATGGTGCAAATGTGTTTGGCTTAGGCAATGGAACTGCCAAAGGTGGTTCTCCTAAAGCCAGGCTTGCTACTTACAAAGTATGCTGGCCACTAGTTGCAGACATTGAATGCTTTGAAGCTGATATCTTGGCAGCCATAGATACAACTATAGATGATGGTGTTGATGTTCTTTCCATTTCTCTTGGAGGGTCTCCTATGGATTACTATCTTGATGTTCTTGCTATTGGAACATTTCATGCTGTTAAGAATGGTATCACTGTAGTATGTGCTGTTGGAAATTCTGGACCACAACCTGGAAGTGTATCAAATTCTGCACCTTGGATACTTACATACTGGTGCAAGTACCTTGGACATGTAAAGTTTGAAGTCGTTGTTGAACTCCCCCAATGGACAACGCTTTGA 1113 0.4106 MRPQKHSIFFLSSLILLYLFQTPAFATKKSYIVYLGSHEHGPGVTEADFDRVTQSHHELLGSYLGSAEKANEAMFYSYTKHINGFAAILEEEEAANLENHPDVVSVFLNQGRKLQTTYSWEFMSQEYNGVTRPFSLFEKARYGEDTIIGSLDTGVWPEHPSFSDEGMRPIPSRWKGTCQSGSTGFPCNRKVIGARYFNKGYASWVTPEHMENSSLNTARDYVGHGSHTLSTLGGNFVHGANVFGLGNGTAKGGSPKARLATYKVCWPLVADIECFEADILAAIDTTIDDGVDVLSISLGGSPMDYYLDVLAIGTFHAVKNGITVVCAVGNSGPQPGSVSNSAPWILTYWCKYLGHVKFEVVVELPQWTTL* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02693 370 CDD Peptidases_S8_3 113 347 IPR034197 -
Rops6g02693 370 Pfam Peptidase inhibitor I9 30 114 IPR010259 -
Rops6g02693 370 Pfam Subtilase family 143 342 IPR000209 GO:0006508|GO:0008236
Rops6g02693 370 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 115 IPR037045 -
Rops6g02693 370 FunFam Subtilisin-like protease SBT5.3 20 115 - -
Rops6g02693 370 Gene3D Peptidase S8/S53 domain 145 347 IPR036852 GO:0004252|GO:0006508
Rops6g02693 370 ProSiteProfiles Serine proteases, subtilase domain profile. 119 370 - -
Rops6g02693 370 SUPERFAMILY Subtilisin-like 9 346 IPR036852 GO:0004252|GO:0006508
Rops6g02693 370 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 347 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02693 Rops-Chr6 48325796 48328003 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02693 19 364 Subtilisin-like Serine Gene Family AT5G59810 62.428 1.39e-147 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02693 - - gmx:100808488 479.559