Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02688 ATGGCGGCAGGACTCTCCGCCGCCACAACCTTAAAGCCCTACACTCTCCTCCGAGCCTCAACCCTTTTCCCTAAGGCAACCCCAACACTGTTCTTCACCCCCTCAAGATGTTTCCATCATAGCACAATCTTTGGAACCCAAAGAAGAATGACTGGCTTCACCGTTTGTGTCCTTATGGAGGATCCAAAACAGAACCTCCAGATCAAAACGGAGGAAGAAGAAGAAGAACCTCCCATTCAAGTGAATCCTCAAGTTGTGTCAGCAAAAATGGCAGAAAAATTGGCCAGAAAGAAGTCTGAGAGGTTCACTTACCTCGTTGCAGCTGTGATGTCTAGCTTTGGTGTCACCTCAATGGCGGTGTTGGCGGTTTATTATAGATTCTCTTGGCAAATGGAGGGTGGAGAGGTTCCTTTGTCTGAAATGTTTGGCACATTTGCCCTCTCAGTTGGTGCTGCTGTGGGTATGGAGTTTTGGGCAAGATGGGCTCATAGGGCTCTATGGCATGCTTCCTTGTGGCACATGCATGAGTCCCATCATAGACCAAGAGAAGGACCATTCGAGCTTAACGACGTTTTTGCTATAATTAACGCTGTCCCTGCAATTGCTCTTCTCTCATATGGTTTTTTCCACAAGGGACTGATCCCTGGCCTCTGTTTCGGTGCAGGTCTTGGAATTACAGTGTTTGGGATGGCCTACATGTTTGTCCACGATGGATTGGTTCATAAGAGATTCCCTGTGGGTCCCATTGCCAACGTGCCCTACTTCAGAAGAGTTGCTGCTGCTCACCAACTTCACCATTCGGACAAATTCAATGGGGTGCCATATGGGCTGTTCTTGGGACCAAAGGAAGTTGAAGAAGTGGGAGGGCTAGAAGAGCTGGAGAAAGAGATAAGTAGGAGAACAAGATCATATACCAGTTCATGA 924 0.4784 MAAGLSAATTLKPYTLLRASTLFPKATPTLFFTPSRCFHHSTIFGTQRRMTGFTVCVLMEDPKQNLQIKTEEEEEEPPIQVNPQVVSAKMAEKLARKKSERFTYLVAAVMSSFGVTSMAVLAVYYRFSWQMEGGEVPLSEMFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSYGFFHKGLIPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVAAAHQLHHSDKFNGVPYGLFLGPKEVEEVGGLEELEKEISRRTRSYTSS* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02688 307 Pfam Fatty acid hydroxylase 151 278 IPR006694 GO:0005506|GO:0008610|GO:0016491
Rops6g02688 307 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 304 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02688 Rops-Chr6 48258229 48260908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02688 1 221 Chloroplast and Mitochondria Gene Families AT4G25700 61.674 1.10e-93 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02688 K15746 - gmx:100802778 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00950 5 18334604 18336891 Rops6g02688 6 48258229 48260908 ECH
Rops6g02688 6 48258229 48260908 Rops6g02688 6 48258229 48260908 ECH
Rops5g00950 5 18334604 18336891 Rops6g02688 6 48258229 48260908 PCT