Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02668 ATGGAACAGAAGCAACTCCTGTTGTCTGCATTGAGTGTTGGGGTTGGTTTGGGTGTGGGGCTGGGATTTAGCACAAGACAGGCTTTGCAAAAATGGGTTGGAGAGGATACTCAGTCTAGTGAGATTTTAGGCGAGCAGATTGTGCTGGAGCTCAAGAACCAAGTGGTTGACTGGAAGGACATCAAAACCACATTTGATGAGTTTCCTTATTACTTAAGTGAAAGAATCCGATTTTTGTTGAAAATTACTGGATATGTTCATTTAAAGCAAGAACATTTTTCCAAGCACATGAGGAACCTTTCACCAGCAAGCAGGTCTATTTTGTTTTCTGGACCTGCAGAACCTTATCAGCAAATGCTTGTCAGAGCTTTAGCACATTATTTTGAGTCAAAGTTACTGTTGCTAGATATTACTGACTTCTCTTTGAAGATGCAGAGCAAATACGGATGTTCTAGAAAAGAACAATATGTTAAAAGGTCCATATCTGAGGTAACTTTGGAGTGCATATCTGGTTTGTTTGGTTCTGACAAAACTAGAGGTACTCTACGACGACAAAGTAGTGGAATTGAAGATTCCACTAATCCTCCAAAGCTTTTTTGGAATGCCTCTACTGCGTCTGATATGAGTAGCACTTCCCAACACGAGCCATCAAACCCAGCTCTTTTGAAGTGCAAAAGTCGCTTCTGCTTTGATGAAAAGCTCTTTGTGCAATCACTTTACAAGGTCTTGGTTTCTATCTCAGAAACTAGTTCCATTATTTTATACGTCAAGGATGTTGAGAAGCTTTTTCTTCAATCACCAAGGATATACAATTTATTCCAAAAGCTATTAAAGAAACTTTCGGGGTCAGTGTTGATAGTCGGTTCCTTTATCTATAATTCAGAAGATGATTGTACAGAAGTTGATGAAAAGCTCACTATGTTATTCCCTTCCACGATTGAGATCAAACCACCAAAAGATGAGACTCATCTTGGGAACTGGAAAACCCAACTAGAAGAGGAAATGAAAATATTTCAGTTTAAAGATAACAAAAACCACATTGTTGAAGTACTTGCCGCAAATGATATTGCTTGTGATGACTTGAATTCAATCTGCCATGCTGACACCATGCTACTTAGTAATTATATTGAAGAGATTGTGGTATATGCAGTTTCTTATCACTTGATAGACACCAAATATCCAGAATACCGAAATGGAAAGCTAATCATATCAGCCAAGAGTTTGTTGCAGGTATTGAGTATGTTCCAGGAAGTTGAATCAAACAAGGAAGTTCTTCCTGACAATGAGTTTGAGGAGCACATAAGATCAGAGGTTATACCTGCAAAAGAGATAAAGGTTACATTTGCAGATATTGGTGCATTGGATGATATTAAAGAATCACTTCATGAAGTGGTCATGCTTCCCCTTAGAAGACCAGACCTATTCAAAGGTGGGATTCTAAAGCCCTGTAGAGGTATATTGCTTTTTGGGCCTCCTGGCACAGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCTAGAGCAAGTTTCATTAATGTCTCAATGTCCACCATCACTTCAAAATGGTTTGGAGAAGCTGAGAAAAATGTTCGAGCTCTGTTTTCACTTGCAGCAAAGATTGCCCCAACTATTATTTTTGTTGATGAGGTTGATAGCATGCTTGGACAACGATCTATAGCTGGGGAGCATGAGGCAATGAGAAAGATTAAAAATGAATTCATGTCCCATTGGGATGGGCTATTGTCAAAACTTGATGAGCAAATTGTAGTTCTTGCTGCCACCAACAGGCCATTTGACCTTGATGAAGCAATTATAAGACGATTTCAACGCAGGATCATGGTTGGTCTTCCATCTGTCGAGAGCAGAGAAATGATCTTGAAAACTCTCCTAGCTAACGAAAAATATGAAAATATAGACTTCAAGGAGCTTTCAACTATGACAGAAGGATATACTGGAAGTGATCTTAAGAATTTGTGTATAGCTGCGACTTTTCGACCTATTAAGGAGCTAATACATCAAGAGAGGATAAAAGAAAAGGAAAAGAAGAAAAAGGAGGCAGAAGTTCAAAGCTCAAAAGAATCCTCTAACACTTCAGAAGATAAAGAAGACCAAGTGATAACCTTGAGGCCTTTAAACATGGAAGACATGAGACAGGCAAAGAGTAAGGTGGCTGCGAGTTTTGCTGCAGAAGGATCAATGATGAGTGAGCTGAAGCAGTGGAATGATTTGTTTGGAGAAGGAGGTTCAAGGAAGAAAATGCAGCTCACTTATTTCCTTTAG 2283 0.3903 MEQKQLLLSALSVGVGLGVGLGFSTRQALQKWVGEDTQSSEILGEQIVLELKNQVVDWKDIKTTFDEFPYYLSERIRFLLKITGYVHLKQEHFSKHMRNLSPASRSILFSGPAEPYQQMLVRALAHYFESKLLLLDITDFSLKMQSKYGCSRKEQYVKRSISEVTLECISGLFGSDKTRGTLRRQSSGIEDSTNPPKLFWNASTASDMSSTSQHEPSNPALLKCKSRFCFDEKLFVQSLYKVLVSISETSSIILYVKDVEKLFLQSPRIYNLFQKLLKKLSGSVLIVGSFIYNSEDDCTEVDEKLTMLFPSTIEIKPPKDETHLGNWKTQLEEEMKIFQFKDNKNHIVEVLAANDIACDDLNSICHADTMLLSNYIEEIVVYAVSYHLIDTKYPEYRNGKLIISAKSLLQVLSMFQEVESNKEVLPDNEFEEHIRSEVIPAKEIKVTFADIGALDDIKESLHEVVMLPLRRPDLFKGGILKPCRGILLFGPPGTGKTMLAKAIANEARASFINVSMSTITSKWFGEAEKNVRALFSLAAKIAPTIIFVDEVDSMLGQRSIAGEHEAMRKIKNEFMSHWDGLLSKLDEQIVVLAATNRPFDLDEAIIRRFQRRIMVGLPSVESREMILKTLLANEKYENIDFKELSTMTEGYTGSDLKNLCIAATFRPIKELIHQERIKEKEKKKKEAEVQSSKESSNTSEDKEDQVITLRPLNMEDMRQAKSKVAASFAAEGSMMSELKQWNDLFGEGGSRKKMQLTYFL* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02668 760 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 445 624 - -
Rops6g02668 760 Pfam ATPase family associated with various cellular activities (AAA) 486 616 IPR003959 GO:0005524|GO:0016887
Rops6g02668 760 Coils Coil 668 697 - -
Rops6g02668 760 ProSitePatterns AAA-protein family signature. 589 608 IPR003960 GO:0005524|GO:0016887
Rops6g02668 760 Gene3D - 445 617 IPR027417 -
Rops6g02668 760 Gene3D - 618 693 - -
Rops6g02668 760 MobiDBLite consensus disorder prediction 680 712 - -
Rops6g02668 760 SMART AAA_5 482 619 IPR003593 GO:0016887
Rops6g02668 760 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 442 665 IPR027417 -
Rops6g02668 760 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 50 759 - -
Rops6g02668 760 MobiDBLite consensus disorder prediction 680 709 - -
Rops6g02668 760 Pfam AAA+ lid domain 638 681 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02668 Rops-Chr6 48015771 48025384 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02668 445 693 Calmodulin-binding Proteins AT3G56690 37.891 5.98e-43 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02668 - - gmx:100793760 1065.45